RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 LRRTM1Q86UE6 522 aa17.94■□□□□ 0.46
TRIM4-202ENST00000354241 CCDC190Q86UF4 302 aa17.94■□□□□ 0.46
TRIM4-202ENST00000354241 MBD3L2Q8NHZ7 208 aaPredicted RBP17.94■□□□□ 0.46
TRIM4-202ENST00000354241 FAM57AQ8TBR7 257 aa17.94■□□□□ 0.46
TRIM4-202ENST00000354241 ACOT12Q8WYK0 555 aa17.94■□□□□ 0.46
TRIM4-202ENST00000354241 SLC17A5Q9NRA2 495 aa17.94■□□□□ 0.46
TRIM4-202ENST00000354241 EPXP11678 715 aa17.94■□□□□ 0.46
TRIM4-202ENST00000354241 CD79AP11912 226 aa17.94■□□□□ 0.46
TRIM4-202ENST00000354241 SPANXN2Q5MJ10 180 aa17.94■□□□□ 0.46
TRIM4-202ENST00000354241 KCTD12Q96CX2 325 aaKnown RBP17.94■□□□□ 0.46
TRIM4-202ENST00000354241 SLC30A2Q9BRI3 323 aa17.94■□□□□ 0.46
TRIM4-202ENST00000354241 GPR84Q9NQS5 396 aa17.94■□□□□ 0.46
TRIM4-202ENST00000354241 TAS2R4Q9NYW5 299 aa17.94■□□□□ 0.46
TRIM4-202ENST00000354241 A0A1B0GTI1 187 aa17.93■□□□□ 0.46
TRIM4-202ENST00000354241 C5orf63A6NC05 138 aa17.93■□□□□ 0.46
TRIM4-202ENST00000354241 ANXA2P2A6NMY6 339 aa17.93■□□□□ 0.46
TRIM4-202ENST00000354241 E9PLN8 166 aa17.93■□□□□ 0.46
TRIM4-202ENST00000354241 HPGDSO60760 199 aa17.93■□□□□ 0.46
TRIM4-202ENST00000354241 PTGER4P35408 488 aa17.93■□□□□ 0.46
TRIM4-202ENST00000354241 THBS2P35442 1172 aa17.93■□□□□ 0.46
TRIM4-202ENST00000354241 PPP3R1P63098 170 aa17.93■□□□□ 0.46
TRIM4-202ENST00000354241 HIKESHIQ53FT3 197 aa17.93■□□□□ 0.46
TRIM4-202ENST00000354241 ANKRD16Q6P6B7 361 aa17.93■□□□□ 0.46
TRIM4-202ENST00000354241 C16orf87Q6PH81 154 aa17.93■□□□□ 0.46
TRIM4-202ENST00000354241 WDFY2Q96P53 400 aa17.93■□□□□ 0.46
TRIM4-202ENST00000354241 CKLFQ9UBR5 152 aa17.93■□□□□ 0.46
TRIM4-202ENST00000354241 FAM215AQ9Y5M1 114 aa17.93■□□□□ 0.46
TRIM4-202ENST00000354241 V9GY05 133 aa17.93■□□□□ 0.46
TRIM4-202ENST00000354241 BOD1L1Q8NFC6 3051 aa17.93■□□□□ 0.46
TRIM4-202ENST00000354241 ZNF503-AS2A6NEH8 195 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 ADRA2CP18825 462 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 ATF1P18846 271 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 ZNF45Q02386 682 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 PRR30Q53SZ7 412 aaPredicted RBP17.92■□□□□ 0.46
TRIM4-202ENST00000354241 HES5Q5TA89 166 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 ASPHD2Q6ICH7 369 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 DRAM2Q6UX65 266 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 C3P1Q6ZMU1 363 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 PARP16Q8N5Y8 322 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 DNAAF1Q8NEP3 725 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 FGGYQ96C11 551 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 SNRNP40Q96DI7 357 aaKnown RBP17.92■□□□□ 0.46
TRIM4-202ENST00000354241 FAM71F1Q96KD3 344 aaPredicted RBP17.92■□□□□ 0.46
TRIM4-202ENST00000354241 ZCCHC4Q9H5U6 513 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 ZNF275Q9NSD4 429 aaPredicted RBP17.92■□□□□ 0.46
TRIM4-202ENST00000354241 IGHV1-2P23083 117 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 TMEM53Q6P2H8 277 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 RPRMLQ8N4K4 120 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 BCL2L2Q92843 193 aaPredicted RBP17.92■□□□□ 0.46
TRIM4-202ENST00000354241 SOX7Q9BT81 388 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 FOXJ3Q9UPW0 622 aa17.92■□□□□ 0.46
TRIM4-202ENST00000354241 A6NIN4 97 aa17.91■□□□□ 0.46
TRIM4-202ENST00000354241 TOXO94900 526 aa17.91■□□□□ 0.46
TRIM4-202ENST00000354241 PAHP00439 452 aa17.91■□□□□ 0.46
TRIM4-202ENST00000354241 TMIGD3P0DMS9 266 aaPredicted RBP17.91■□□□□ 0.46
TRIM4-202ENST00000354241 APEX1P27695 318 aaKnown RBP17.91■□□□□ 0.46
TRIM4-202ENST00000354241 ETV6P41212 452 aa17.91■□□□□ 0.46
TRIM4-202ENST00000354241 HGFACQ04756 655 aa17.91■□□□□ 0.46
TRIM4-202ENST00000354241 KRTAP27-1Q3LI81 207 aa17.91■□□□□ 0.46
TRIM4-202ENST00000354241 GFRALQ6UXV0 394 aa17.91■□□□□ 0.46
TRIM4-202ENST00000354241 Q6ZT83 130 aa17.91■□□□□ 0.46
TRIM4-202ENST00000354241 CPEB3Q8NE35 698 aaKnown RBP17.91■□□□□ 0.46
TRIM4-202ENST00000354241 OR1J2Q8NGS2 313 aa17.91■□□□□ 0.46
TRIM4-202ENST00000354241 TRMT10AQ8TBZ6 339 aaKnown RBP17.91■□□□□ 0.46
TRIM4-202ENST00000354241 DIRAS2Q96HU8 199 aa17.91■□□□□ 0.46
TRIM4-202ENST00000354241 SLX1AQ9BQ83 275 aa17.91■□□□□ 0.46
TRIM4-202ENST00000354241 NOX3Q9HBY0 568 aa17.91■□□□□ 0.46
TRIM4-202ENST00000354241 ASF1BQ9NVP2 202 aa17.91■□□□□ 0.46
TRIM4-202ENST00000354241 BSNQ9UPA5 3926 aa17.91■□□□□ 0.46
TRIM4-202ENST00000354241 RTTNQ86VV8 2226 aa17.91■□□□□ 0.46
TRIM4-202ENST00000354241 A0A0B4J203 849 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 MED19A0JLT2 244 aaPredicted RBP17.9■□□□□ 0.46
TRIM4-202ENST00000354241 IFITM5A6NNB3 132 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 TNFSF13O75888 250 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 UBL3O95164 117 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 FSTP19883 344 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 ARR3P36575 388 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 GNALP38405 381 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 RAB1AP62820 205 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 SNAI3Q3KNW1 292 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 DOK3Q7L591 496 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 NANOS1Q8WY41 292 aaKnown RBP17.9■□□□□ 0.46
TRIM4-202ENST00000354241 OR10A2Q9H208 303 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 PROCRQ9UNN8 238 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 PRRC2CQ9Y520 2896 aaKnown RBP17.9■□□□□ 0.46
TRIM4-202ENST00000354241 AIPO00170 330 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 RAD51DO75771 328 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 LYZL6O75951 148 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 IL2RAP01589 272 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 LCATP04180 440 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 SNRPBP14678 240 aaKnown RBP17.9■□□□□ 0.46
TRIM4-202ENST00000354241 ZNF20P17024 532 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 IGFBP3P17936 291 aaPredicted RBP17.9■□□□□ 0.46
TRIM4-202ENST00000354241 CCL1P22362 96 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 PPP5CP53041 499 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 TGFBR3Q03167 851 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 TBRG1Q3YBR2 411 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 OR52H1Q8NGJ2 320 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 ZNF671Q8TAW3 534 aa17.9■□□□□ 0.46
TRIM4-202ENST00000354241 ADAT3Q96EY9 351 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms