RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TCTN2Q96GX1 697 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 ZFYVE21Q9BQ24 234 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 NUDT9Q9BW91 350 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 RAB33BQ9H082 229 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 UBQLN4Q9NRR5 601 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 CXXC1Q9P0U4 656 aaPredicted RBP9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 GDF2Q9UK05 429 aaPredicted RBP9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 SCN3AQ9NY46 2000 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 HTTP42858 3142 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 GOLGA4Q13439 2230 aaKnown RBP9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 LOC100509620A0A075B734 347 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 PRSS38A1L453 326 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 FAM221BA6H8Z2 402 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 OTOL1A6NHN0 477 aaPredicted RBP9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 UMAD1C9J7I0 102 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 PLRG1O43660 514 aaKnown RBP9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 KAT7O95251 611 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 TSPAN15O95858 294 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 F13BP05160 661 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 TBC1D3HP0C7X1 549 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 PNMTP11086 282 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 ID4P47928 161 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 LSSP48449 732 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 EMDP50402 254 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 NDUFA6P56556 154 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 RAB38P57729 211 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 RPS23P62266 143 aaKnown RBP9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 FOXO1Q12778 655 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 IL15RAQ13261 267 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 EIF2B1Q14232 305 aaKnown RBP9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 EBPQ15125 230 aaKnown RBP9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 TCEA2Q15560 299 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 MOGAT2Q3SYC2 334 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 ACTBL2Q562R1 376 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 FAM78AQ5JUQ0 283 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 GLYATL3Q5SZD4 288 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 ZNF776Q68DI1 518 aaPredicted RBP9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 TMEM225Q6GV28 225 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 KIRREL2Q6UWL6 708 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 VITQ6UXI7 678 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 MDGA2Q7Z553 956 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 TRAPPC6BQ86SZ2 158 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 PPP1R3BQ86XI6 285 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 UBAC2Q8NBM4 344 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 OR10D4PQ8NGN7 298 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 ROBO4Q8WZ75 1007 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 C2orf50Q96LR7 162 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 FAM86C1Q9NVL1 165 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 HIF3AQ9Y2N7 669 aa9.24□□□□□ -0.93
CHRNA1-202ENST00000348749 TCAPO15273 167 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 CTSVO60911 334 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 ADAP1O75689 374 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 JTBO76095 146 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 OR2C1O95371 312 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 SFT2D2O95562 160 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 GPANK1O95872 356 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 MNX1P50219 401 aaPredicted RBP9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 LSM6P62312 80 aaKnown RBP9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 RAP1AP62834 184 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 BIKQ13323 160 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 GAMTQ14353 236 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 EXOSC7Q15024 291 aaKnown RBP9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 RSU1Q15404 277 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 TOMM34Q15785 309 aaPredicted RBP9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 TCEAL6Q6IPX3 200 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 OPN5Q6U736 354 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 RNF44Q7L0R7 432 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 CA13Q8N1Q1 262 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 KDM8Q8N371 416 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 DTWD2Q8NBA8 298 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 POC1AQ8NBT0 407 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 ACBD4Q8NC06 268 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 BHLHE23Q8NDY6 225 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 OR9K2Q8NGE7 335 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 MAFIPQ8WZ33 124 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 MUCL1Q96DR8 90 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 C20orf24Q9BUV8 137 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 SLC26A1Q9H2B4 701 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 ZMAT3Q9HA38 289 aaKnown RBP9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 FBRSQ9HAH7 460 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 TBC1D29Q9UFV1 150 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 ZNF346Q9UL40 294 aaKnown RBP9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 MRPS18BQ9Y676 258 aaKnown RBP9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 A0A1W2PP55 124 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 A0A1W2PQU0 124 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 FITM1A5D6W6 292 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 MEGF11A6BM72 1044 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 CEACAM18A8MTB9 384 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 RAB27BO00194 218 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 ADAM10O14672 748 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 CTNNB1P35222 781 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 HRH1P35367 487 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 THBS4P35443 961 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 GRK6P43250 576 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 RPS10P46783 165 aaKnown RBP9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 RNF4P78317 190 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 PSG6Q00889 435 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 RAB32Q13637 225 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 CCINQ13939 588 aa9.23□□□□□ -0.93
CHRNA1-202ENST00000348749 SURF2Q15527 256 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms