RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 TOMM20Q15388 145 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 ZNF239Q16600 458 aaKnown RBP13.73□□□□□ -0.21
LMNA-201ENST00000347559 CRIPAKQ8N1N5 446 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 OR4C3Q8NH37 302 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 OTOSQ8NHW6 89 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 LCN9Q8WX39 176 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 AQP3Q92482 292 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 ZNF775Q96BV0 537 aaPredicted RBP13.73□□□□□ -0.21
LMNA-201ENST00000347559 CYYR1Q96J86 154 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 OR8B4Q96RC9 309 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 SERINC2Q96SA4 455 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 LPAR4Q99677 370 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 SMOC1Q9H4F8 434 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 FLVCR1Q9Y5Y0 555 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 TIMP1P01033 207 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 CST4P01036 141 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 HIST1H1BP16401 226 aaKnown RBP13.73□□□□□ -0.21
LMNA-201ENST00000347559 CAMLGP49069 296 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 ZNF157P51786 506 aaPredicted RBP13.73□□□□□ -0.21
LMNA-201ENST00000347559 TAS2R31P59538 309 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 RPS23P62266 143 aaKnown RBP13.73□□□□□ -0.21
LMNA-201ENST00000347559 RPS4XP62701 263 aaKnown RBP13.73□□□□□ -0.21
LMNA-201ENST00000347559 PSG6Q00889 435 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 RPL18Q07020 188 aaKnown RBP13.73□□□□□ -0.21
LMNA-201ENST00000347559 ADAMTSL4Q6UY14 1074 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 HHIPL1Q96JK4 782 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 TSPAN32Q96QS1 320 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 RAB11FIP5Q9BXF6 653 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 C5orf66Q9H5L9 145 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 OBSL1O75147 1896 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 IGKV1D-42A0A075B6H8 117 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 SCGB1D2O95969 90 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 RPL12P30050 165 aaKnown RBP13.73□□□□□ -0.21
LMNA-201ENST00000347559 FCGR2CP31995 323 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 SNCAP37840 140 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 GNALP38405 381 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 P2RY2P41231 377 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 ZNHIT3Q15649 155 aaPredicted RBP13.73□□□□□ -0.21
LMNA-201ENST00000347559 ZNF343Q6P1L6 599 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 TMEM184AQ6ZMB5 413 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 MISP3Q96FF7 219 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 POMT1Q9Y6A1 747 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 COLEC10Q9Y6Z7 277 aa13.73□□□□□ -0.21
LMNA-201ENST00000347559 A0A1W2PQ45 241 aaPredicted RBP13.72□□□□□ -0.21
LMNA-201ENST00000347559 A0A1W2PQY0 241 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 ZNF726A6NNF4 738 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 METTL12A8MUP2 240 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 K7EPK0 472 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 HKR1P10072 659 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 CST5P28325 142 aaPredicted RBP13.72□□□□□ -0.21
LMNA-201ENST00000347559 CHAF1BQ13112 559 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 TOMM34Q15785 309 aaPredicted RBP13.72□□□□□ -0.21
LMNA-201ENST00000347559 C21orf62-AS1Q17RA5 79 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 FAM71E2Q8N5Q1 922 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 TERB2Q8NHR7 220 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 TMEM230Q96A57 120 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 EMC9Q9Y3B6 208 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 LSM5Q9Y4Y9 91 aaKnown RBP13.72□□□□□ -0.21
LMNA-201ENST00000347559 INSL6Q9Y581 213 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 NUP210LQ5VU65 1888 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 SFT2D2O95562 160 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 GPR75O95800 540 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 PET100P0DJ07 73 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 COX15Q7KZN9 410 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 HOGA1Q86XE5 327 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 THRSPQ92748 146 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 CPNE4Q96A23 557 aaPredicted RBP13.72□□□□□ -0.21
LMNA-201ENST00000347559 MALSU1Q96EH3 234 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 SPACA7Q96KW9 195 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 C2orf50Q96LR7 162 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 CNTNAP3Q9BZ76 1288 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 CNTD2Q9H8S5 307 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 RAB18Q9NP72 206 aa13.72□□□□□ -0.21
LMNA-201ENST00000347559 ZNF107Q9UII5 783 aaPredicted RBP13.72□□□□□ -0.21
LMNA-201ENST00000347559 TSTD3H0UI37 97 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 HRKO00198 91 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 NKX2-2O95096 273 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 KNG1P01042 644 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 ZNF74Q16587 644 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 ISXQ2M1V0 245 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 PTCRAQ6ISU1 281 aaPredicted RBP13.71□□□□□ -0.21
LMNA-201ENST00000347559 FBXO42Q6P3S6 717 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 HEPN1Q6WQI6 88 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 ZNF574Q6ZN55 896 aaPredicted RBP13.71□□□□□ -0.21
LMNA-201ENST00000347559 MFSD8Q8NHS3 518 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 RBM14Q96PK6 669 aaKnown RBP13.71□□□□□ -0.21
LMNA-201ENST00000347559 PISDQ9UG56 409 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 MAFFQ9ULX9 164 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 STARD10Q9Y365 291 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 C5orf42Q9H799 3197 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 CTSVO60911 334 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 F10P00742 488 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 CD37P11049 281 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 FABP4P15090 132 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 ADPRHP54922 357 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 TMEM33P57088 247 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 RHEBQ15382 184 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 ANGPTL5Q86XS5 388 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 TGIF2LXQ8IUE1 241 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 AVL9Q8NBF6 648 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms