RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 C4orf46Q504U0 113 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 GVQW1Q8N7I0 195 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 OR13C8Q8NGS7 320 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 OR2AJ1Q8NGZ0 328 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 MR1Q95460 341 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 SFXN2Q96NB2 322 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 TMPRSS13Q9BYE2 586 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 RAB22AQ9UL26 194 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 FARSAQ9Y285 508 aaKnown RBP13.67□□□□□ -0.22
UPF3B-202ENST00000345865 HDGFL3Q9Y3E1 203 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 HS3ST3B1Q9Y662 390 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 C5orf63A6NC05 138 aa13.66□□□□□ -0.22
UPF3B-202ENST00000345865 NTN3O00634 580 aaPredicted RBP13.66□□□□□ -0.22
UPF3B-202ENST00000345865 IFNA7P01567 189 aa13.66□□□□□ -0.22
UPF3B-202ENST00000345865 OR4E1P0C645 316 aa13.66□□□□□ -0.22
UPF3B-202ENST00000345865 ADH6P28332 368 aa13.66□□□□□ -0.22
UPF3B-202ENST00000345865 ZNF121P58317 390 aaPredicted RBP13.66□□□□□ -0.22
UPF3B-202ENST00000345865 TMPPEQ6ZT21 453 aa13.66□□□□□ -0.22
UPF3B-202ENST00000345865 UBALD2Q8IYN6 164 aa13.66□□□□□ -0.22
UPF3B-202ENST00000345865 SLC22A24Q8N4F4 322 aa13.66□□□□□ -0.22
UPF3B-202ENST00000345865 ALX4Q9H161 411 aaPredicted RBP13.66□□□□□ -0.22
UPF3B-202ENST00000345865 UBQLN2Q9UHD9 624 aa13.66□□□□□ -0.22
UPF3B-202ENST00000345865 TMEM82A0PJX8 343 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 ZNF736B4DX44 427 aaPredicted RBP13.65□□□□□ -0.22
UPF3B-202ENST00000345865 TP53I11O14683 189 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 RGS11O94810 467 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 CSN2P05814 226 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 EIF1P41567 113 aaKnown RBP13.65□□□□□ -0.22
UPF3B-202ENST00000345865 CLDN17P56750 224 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 H3F3AP84243 136 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 PHYHD1Q5SRE7 291 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 ATPAF1Q5TC12 328 aaPredicted RBP13.65□□□□□ -0.22
UPF3B-202ENST00000345865 C17orf107Q6ZR85 190 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 CHMP1BQ7LBR1 199 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 TMED4Q7Z7H5 227 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 CD163Q86VB7 1156 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 FJX1Q86VR8 437 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 WDR5BQ86VZ2 330 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 OR5AS1Q8N127 324 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 BPIFB2Q8N4F0 458 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 OR5D14Q8NGL3 314 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 SLC25A43Q8WUT9 341 aaPredicted RBP13.65□□□□□ -0.22
UPF3B-202ENST00000345865 NUDCD2Q8WVJ2 157 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 TNFAIP8L1Q8WVP5 186 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 SLCO5A1Q9H2Y9 848 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 IGHV3-15A0A0B4J1V0 119 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 L7N2F9 121 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 RAB3AP20336 220 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 NKPD1Q17RQ9 610 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 CDNFQ49AH0 187 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 DMRTC1Q5HYR2 192 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 CLLU1Q5K131 121 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 SFRP5Q5T4F7 317 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 OR52W1Q6IF63 320 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 ABHD12BQ7Z5M8 362 aaPredicted RBP13.65□□□□□ -0.22
UPF3B-202ENST00000345865 ANGPTL5Q86XS5 388 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 GTPBP8Q8N3Z3 284 aaPredicted RBP13.65□□□□□ -0.22
UPF3B-202ENST00000345865 MRGPRFQ96AM1 343 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 ZBTB8AQ96BR9 441 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 UQCC2Q9BRT2 126 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 EDEM2Q9BV94 578 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 ZNF700Q9H0M5 742 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 GPR84Q9NQS5 396 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 GPN3Q9UHW5 284 aaPredicted RBP13.65□□□□□ -0.22
UPF3B-202ENST00000345865 FBXO4Q9UKT5 387 aa13.65□□□□□ -0.22
UPF3B-202ENST00000345865 LOC102725191A0A1B0GVB3 256 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 OR14I1A6ND48 311 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 METTL21EPA6NDL7 271 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 CYC1P08574 325 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 GNB3P16520 340 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 SEC61A1P61619 476 aaKnown RBP13.64□□□□□ -0.23
UPF3B-202ENST00000345865 ZFP36L1Q07352 338 aaKnown RBP13.64□□□□□ -0.23
UPF3B-202ENST00000345865 KCNMB1Q16558 191 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 SCGB2B2Q4G0G5 96 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 LY6G6FQ5SQ64 297 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 NAA40Q86UY6 237 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 DTX1Q86Y01 620 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 CDH26Q8IXH8 852 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 NICN1Q9BSH3 213 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 ZNF416Q9BWM5 594 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 NXT1Q9UKK6 140 aaKnown RBP13.64□□□□□ -0.23
UPF3B-202ENST00000345865 COLQQ9Y215 455 aaPredicted RBP13.64□□□□□ -0.23
UPF3B-202ENST00000345865 ZNF726A6NNF4 738 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 F5H5P2 479 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 ARPC5O15511 151 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 ZIC3O60481 467 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 BPNT1O95861 308 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 KLK3P07288 261 aaPredicted RBP13.64□□□□□ -0.23
UPF3B-202ENST00000345865 POU3F2P20265 443 aaPredicted RBP13.64□□□□□ -0.23
UPF3B-202ENST00000345865 ZNF93P35789 620 aaPredicted RBP13.64□□□□□ -0.23
UPF3B-202ENST00000345865 SLC35A1P78382 337 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 TAF13Q15543 124 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 ZNF468Q5VIY5 522 aaPredicted RBP13.64□□□□□ -0.23
UPF3B-202ENST00000345865 RHOUQ7L0Q8 258 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 TRAPPC6BQ86SZ2 158 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 ZNF584Q8IVC4 421 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 MAML2Q8IZL2 1156 aaPredicted RBP13.64□□□□□ -0.23
UPF3B-202ENST00000345865 CHST4Q8NCG5 386 aa13.64□□□□□ -0.23
UPF3B-202ENST00000345865 C1orf147Q96MC9 270 aaPredicted RBP13.64□□□□□ -0.23
UPF3B-202ENST00000345865 ZNF385AQ96PM9 386 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms