RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.61□□□□□ -0.235e-8■■■■■ 29.2
ATG4B-201ENST00000344376 VGLL3A8MV65 326 aa13.61□□□□□ -0.23
ATG4B-201ENST00000344376 FAM157AC9JC47 383 aa13.61□□□□□ -0.23
ATG4B-201ENST00000344376 ANXA8P13928 327 aa13.61□□□□□ -0.23
ATG4B-201ENST00000344376 SRP14P37108 136 aaKnown RBP13.61□□□□□ -0.23
ATG4B-201ENST00000344376 RPS27P42677 84 aaKnown RBP13.61□□□□□ -0.23
ATG4B-201ENST00000344376 RSPO1Q2MKA7 263 aaPredicted RBP13.61□□□□□ -0.23
ATG4B-201ENST00000344376 ACSM5Q6NUN0 579 aa13.61□□□□□ -0.23
ATG4B-201ENST00000344376 LYPD4Q6UWN0 246 aa13.61□□□□□ -0.23
ATG4B-201ENST00000344376 DCXRQ7Z4W1 244 aa13.61□□□□□ -0.23
ATG4B-201ENST00000344376 TMEM179BQ7Z7N9 219 aa13.61□□□□□ -0.23
ATG4B-201ENST00000344376 ZNF511Q8NB15 262 aa13.61□□□□□ -0.23
ATG4B-201ENST00000344376 PAPD5Q8NDF8 572 aaKnown RBP13.61□□□□□ -0.23
ATG4B-201ENST00000344376 ZNRF4Q8WWF5 429 aa13.61□□□□□ -0.23
ATG4B-201ENST00000344376 OR2V2Q96R30 315 aa13.61□□□□□ -0.23
ATG4B-201ENST00000344376 CADM1Q9BY67 442 aaKnown RBP13.61□□□□□ -0.23
ATG4B-201ENST00000344376 HIF1ANQ9NWT6 349 aa13.61□□□□□ -0.23
ATG4B-201ENST00000344376 KIF17Q9P2E2 1029 aa13.61□□□□□ -0.23
ATG4B-201ENST00000344376 PPP1R3CQ9UQK1 317 aa13.61□□□□□ -0.23
ATG4B-201ENST00000344376 TRAV20A0A0B4J274 112 aa13.6□□□□□ -0.23
ATG4B-201ENST00000344376 IQCF6A8MYZ5 107 aa13.6□□□□□ -0.23
ATG4B-201ENST00000344376 ZNF593O00488 134 aaPredicted RBP13.6□□□□□ -0.23
ATG4B-201ENST00000344376 DEAF1O75398 565 aaPredicted RBP13.6□□□□□ -0.23
ATG4B-201ENST00000344376 HMGN1P05114 100 aa13.6□□□□□ -0.23
ATG4B-201ENST00000344376 OSMP13725 252 aa13.6□□□□□ -0.23
ATG4B-201ENST00000344376 SRP9P49458 86 aaKnown RBP13.6□□□□□ -0.23
ATG4B-201ENST00000344376 GTF2A1P52655 376 aaPredicted RBP13.6□□□□□ -0.23
ATG4B-201ENST00000344376 TEX30Q5JUR7 227 aa13.6□□□□□ -0.23
ATG4B-201ENST00000344376 MRPL21Q7Z2W9 205 aaKnown RBP13.6□□□□□ -0.23
ATG4B-201ENST00000344376 ZNF283Q8N7M2 679 aa13.6□□□□□ -0.23
ATG4B-201ENST00000344376 BHLHE23Q8NDY6 225 aa13.6□□□□□ -0.23
ATG4B-201ENST00000344376 ITLN1Q8WWA0 313 aa13.6□□□□□ -0.23
ATG4B-201ENST00000344376 DNAJC9Q8WXX5 260 aa13.6□□□□□ -0.23
ATG4B-201ENST00000344376 TMEM106BQ9NUM4 274 aa13.6□□□□□ -0.23
ATG4B-201ENST00000344376 NPTNQ9Y639 398 aa13.6□□□□□ -0.23
ATG4B-201ENST00000344376 MALRD1Q5VYJ5 2156 aa13.6□□□□□ -0.23
ATG4B-201ENST00000344376 IFNL4K9M1U5 179 aa13.59□□□□□ -0.23
ATG4B-201ENST00000344376 ATP6V1G2O95670 118 aa13.59□□□□□ -0.23
ATG4B-201ENST00000344376 IGHV2-5P01817 119 aa13.59□□□□□ -0.23
ATG4B-201ENST00000344376 CLUP10909 449 aa13.59□□□□□ -0.23
ATG4B-201ENST00000344376 THBS2P35442 1172 aa13.59□□□□□ -0.23
ATG4B-201ENST00000344376 GK2Q14410 553 aaPredicted RBP13.59□□□□□ -0.23
ATG4B-201ENST00000344376 GINS1Q14691 196 aa13.59□□□□□ -0.23
ATG4B-201ENST00000344376 PCK2Q16822 640 aa13.59□□□□□ -0.23
ATG4B-201ENST00000344376 DRAM2Q6UX65 266 aa13.59□□□□□ -0.23
ATG4B-201ENST00000344376 PGAP1Q75T13 922 aa13.59□□□□□ -0.23
ATG4B-201ENST00000344376 OR10AD1Q8NGE0 317 aa13.59□□□□□ -0.23
ATG4B-201ENST00000344376 OR10S1Q8NGN2 331 aa13.59□□□□□ -0.23
ATG4B-201ENST00000344376 SPRYD4Q8WW59 207 aaPredicted RBP13.59□□□□□ -0.23
ATG4B-201ENST00000344376 SLAMF6Q96DU3 332 aa13.59□□□□□ -0.23
ATG4B-201ENST00000344376 PLEKHA8Q96JA3 519 aa13.59□□□□□ -0.23
ATG4B-201ENST00000344376 INTS14Q96SY0 518 aa13.59□□□□□ -0.23
ATG4B-201ENST00000344376 CENPMQ9NSP4 180 aa13.59□□□□□ -0.23
ATG4B-201ENST00000344376 TMEM100Q9NV29 134 aa13.59□□□□□ -0.23
ATG4B-201ENST00000344376 FAM183AA6NL82 134 aa13.58□□□□□ -0.23
ATG4B-201ENST00000344376 ZNF878C9JN71 531 aa13.58□□□□□ -0.23
ATG4B-201ENST00000344376 PRR23D1E9PI22 279 aaPredicted RBP13.58□□□□□ -0.23
ATG4B-201ENST00000344376 PRR23D2P0DMB1 279 aaPredicted RBP13.58□□□□□ -0.23
ATG4B-201ENST00000344376 GSTT1P30711 240 aa13.58□□□□□ -0.23
ATG4B-201ENST00000344376 SLC15A1P46059 708 aa13.58□□□□□ -0.23
ATG4B-201ENST00000344376 SPRNQ5BIV9 151 aa13.58□□□□□ -0.23
ATG4B-201ENST00000344376 SHQ1Q6PI26 577 aaKnown RBP13.58□□□□□ -0.23
ATG4B-201ENST00000344376 ERI1Q8IV48 349 aaKnown RBP13.58□□□□□ -0.23
ATG4B-201ENST00000344376 HS3ST5Q8IZT8 346 aa13.58□□□□□ -0.23
ATG4B-201ENST00000344376 SPICQ8N5J4 248 aa13.58□□□□□ -0.23
ATG4B-201ENST00000344376 OR6N2Q8NGY6 317 aa13.58□□□□□ -0.23
ATG4B-201ENST00000344376 SLCO4A1Q96BD0 722 aa13.58□□□□□ -0.23
ATG4B-201ENST00000344376 NRBF2Q96F24 287 aa13.58□□□□□ -0.23
ATG4B-201ENST00000344376 SLC30A2Q9BRI3 323 aa13.58□□□□□ -0.23
ATG4B-201ENST00000344376 MED20Q9H944 212 aa13.58□□□□□ -0.23
ATG4B-201ENST00000344376 UBAP1Q9NZ09 502 aa13.58□□□□□ -0.23
ATG4B-201ENST00000344376 NOP16Q9Y3C1 178 aaKnown RBP13.58□□□□□ -0.23
ATG4B-201ENST00000344376 GLCEO94923 617 aa13.58□□□□□ -0.24
ATG4B-201ENST00000344376 PRKACGP22612 351 aa13.58□□□□□ -0.24
ATG4B-201ENST00000344376 OTX1P32242 354 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-201ENST00000344376 RAD23AP54725 363 aa13.58□□□□□ -0.24
ATG4B-201ENST00000344376 GRB2P62993 217 aaKnown RBP13.58□□□□□ -0.24
ATG4B-201ENST00000344376 EIF2B1Q14232 305 aaKnown RBP13.58□□□□□ -0.24
ATG4B-201ENST00000344376 LINC01590Q5TEZ4 76 aa13.58□□□□□ -0.24
ATG4B-201ENST00000344376 SHFQ7M4L6 423 aa13.58□□□□□ -0.24
ATG4B-201ENST00000344376 NAA40Q86UY6 237 aa13.58□□□□□ -0.24
ATG4B-201ENST00000344376 TEX29Q8N6K0 151 aa13.58□□□□□ -0.24
ATG4B-201ENST00000344376 ST7LQ8TDW4 575 aa13.58□□□□□ -0.24
ATG4B-201ENST00000344376 MEGF10Q96KG7 1140 aa13.58□□□□□ -0.24
ATG4B-201ENST00000344376 KCNJ15Q99712 375 aa13.58□□□□□ -0.24
ATG4B-201ENST00000344376 MDFIQ99750 246 aa13.58□□□□□ -0.24
ATG4B-201ENST00000344376 OR51V1Q9H2C8 321 aa13.58□□□□□ -0.24
ATG4B-201ENST00000344376 PCDHB10Q9UN67 800 aa13.58□□□□□ -0.24
ATG4B-201ENST00000344376 TIPRLO75663 272 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 IGHV2-70P01814 119 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 APOC1P02654 83 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 SBK2P0C263 348 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 PSKH1P11801 424 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 HSD11B1P28845 292 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 MMP16P51512 607 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 PRKXP51817 358 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 BTG1P62324 171 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 PLBD1Q6P4A8 553 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 SPATC1Q76KD6 591 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 CXXC5Q7LFL8 322 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms