RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PPRC1Q5VV67 1664 aaKnown RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 KBTBD11-OT1A0A1B0GTJ5 212 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 A0A1B0GW15 77 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 AGPAT2O15120 278 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 CSF2RBP32927 897 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 MALLQ13021 153 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 UGCGQ16739 394 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SMIM21Q3B7S5 101 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 PIP5KL1Q5T9C9 394 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 B3GNT8Q7Z7M8 397 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 FAM151AQ8WW52 585 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SF3B5Q9BWJ5 86 aaKnown RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 CACNA1HO95180 2353 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 HSPB1P04792 205 aaKnown RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 FTH1P19P0C7X4 201 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 COX5AP20674 150 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 DUSP1P28562 367 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 CACNG1Q06432 222 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF750Q32MQ0 723 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 FBXW9Q5XUX1 488 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OVCH1Q7RTY7 1134 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 C11orf42Q8N5U0 333 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 TRBV6-7A0A0A0MS04 114 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 NUDT14O95848 222 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 EOMESO95936 686 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OR5AL1P0C617 328 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OSMP13725 252 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 PPP2CAP67775 309 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 LAMTOR1Q6IAA8 161 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 MRM1Q6IN84 353 aaKnown RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 EMG1Q92979 244 aaKnown RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM125Q96AQ2 219 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 NKX3-1Q99801 234 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 RAB6CQ9H0N0 254 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 HS3ST4Q9Y661 456 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 HAS3O00219 553 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 MPPED1O15442 326 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 PNMTP11086 282 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 CTSSP25774 331 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SFRP4Q6FHJ7 346 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM86AQ8N2M4 240 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OR6N2Q8NGY6 317 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OR4S2Q8NH73 311 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 LRRN4Q8WUT4 740 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 IL25Q9H293 177 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 TXNIPQ9H3M7 391 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 PIK3C2BO00750 1634 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 PEX12O00623 359 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SMPD2O60906 423 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 FPR3P25089 353 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 RPE65Q16518 533 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SOWAHCQ53LP3 525 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 LRRTM4Q86VH4 590 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SYNPRQ8TBG9 265 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 GPR20Q99678 358 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM208Q9BTX3 173 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 MUTYHQ9UIF7 546 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 EFNA3P52797 238 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 CLDN6P56747 220 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SFXN1Q9H9B4 322 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 PLSCR3Q9NRY6 295 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OSER1Q9NX31 292 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 PIPOXQ9P0Z9 390 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 TESQ9UGI8 421 aaKnown RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OR2W5A6NFC9 320 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 ACTL6BO94805 426 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SLC25A27O95847 323 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 GDF5P43026 501 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 AGTR2P50052 363 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 CLDN18P56856 261 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OR2A2Q6IF42 318 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM251Q8N6I4 163 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM145Q8NBT3 493 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 NUDCD2Q8WVJ2 157 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SLC52A2Q9HAB3 445 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 NGBQ9NPG2 151 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 CHRM2P08172 466 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 MMP2P08253 660 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 ZXDBP98169 803 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 C9orf152Q5JTZ5 239 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 FKRPQ9H9S5 495 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OBP2AQ9NY56 170 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 PPIL1Q9Y3C6 166 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 ANKRD34CP0C6C1 535 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OR2T7P0C7T2 308 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SEC11BP0C7V7 166 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 PSMB2P49721 201 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 GKN2Q86XP6 184 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 KRTCAP2Q8N6L1 136 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 PPP1R35Q8TAP8 253 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 HARBI1Q96MB7 349 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 NPDC1Q9NQX5 325 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OR51F1A6NGY5 319 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SDHDO14521 159 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 RAB9AP51151 201 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SRSF9Q13242 221 aaKnown RBP eCLIP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 MBOAT2Q6ZWT7 520 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 PLEKHF2Q9H8W4 249 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 ST20Q9HBF5 79 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 B4GALT6Q9UBX8 382 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms