RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 WDR45Q9Y484 360 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 OR51B4Q9Y5P0 310 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 DOCK6Q96HP0 2047 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 GVINP1Q7Z2Y8 2422 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 TLCD2A6NGC4 264 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 MSGN1A6NI15 193 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 OR2AG2A6NM03 316 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 CDRT15L2A8MXV6 281 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 PPP5D1E7EU14 171 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 PRAMEF26H0Y7S4 382 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 CYB5BO43169 146 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 EFSO43281 561 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 TBL1XO60907 577 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 ALOX12BO75342 701 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 STC2O76061 302 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 DANCRP0C864 163 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 AK4P27144 223 aaPredicted RBP7.31□□□□□ -1.24
ATG4A-201ENST00000343524 SSR2P43308 183 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 SOX2P48431 317 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 AFF3P51826 1226 aaKnown RBP7.31□□□□□ -1.24
ATG4A-201ENST00000343524 ZNF136P52737 540 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 NANOS3P60323 173 aaKnown RBP7.31□□□□□ -1.24
ATG4A-201ENST00000343524 ERVFC1-1P60608 527 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 UBE2KP61086 200 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 GABREP78334 506 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 REEP5Q00765 189 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 MEF2AQ02078 507 aaPredicted RBP7.31□□□□□ -1.24
ATG4A-201ENST00000343524 TLE4Q04727 773 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 OR1Q1Q15612 314 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 C2orf76Q3KRA6 126 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 CTXN3Q4LDR2 81 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 TMEM35AQ53FP2 167 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 ZNF684Q5T5D7 378 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 RPUSD3Q6P087 351 aaKnown RBP7.31□□□□□ -1.24
ATG4A-201ENST00000343524 OLIG3Q7RTU3 272 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 SLC16A9Q7RTY1 509 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 ZNF573Q86YE8 665 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 ZNF664Q8N3J9 261 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 DTWD2Q8NBA8 298 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 ADPRHL1Q8NDY3 354 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 NUP43Q8NFH3 380 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 OR5K2Q8NHB8 316 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 MFSD8Q8NHS3 518 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 Q8WTZ3 238 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 ANKRD9Q96BM1 317 aaPredicted RBP7.31□□□□□ -1.24
ATG4A-201ENST00000343524 SLC41A2Q96JW4 573 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 SNHG12Q9BXW3 62 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 GPR87Q9BY21 358 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 OR8D2Q9GZM6 311 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 TCEAL2Q9H3H9 227 aaPredicted RBP7.31□□□□□ -1.24
ATG4A-201ENST00000343524 PLEKHA2Q9HB19 425 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 C5AR2Q9P296 337 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 CHRNA9Q9UGM1 479 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 GTF2A1LQ9UNN4 478 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 MRPS18CQ9Y3D5 142 aaKnown RBP7.31□□□□□ -1.24
ATG4A-201ENST00000343524 MMP24Q9Y5R2 645 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 SLCO1B1Q9Y6L6 691 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 PLXNA2O75051 1894 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 A0A0A6YYD5 115 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 MEGF11A6BM72 1044 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 H0YIZ8 118 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 TMPRSS11DO60235 418 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 SFT2D2O95562 160 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 NTN1O95631 604 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 ERCC1P07992 297 aaPredicted RBP7.3□□□□□ -1.24
ATG4A-201ENST00000343524 GZMBP10144 247 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 FOLR1P15328 257 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 AKR1C4P17516 323 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 CCKARP32238 428 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 TAGLN2P37802 199 aaKnown RBP7.3□□□□□ -1.24
ATG4A-201ENST00000343524 EFNB2P52799 333 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 PMPCAQ10713 525 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 AGERQ15109 404 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 AARDQ4LEZ3 155 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 RIPPLY2Q5TAB7 128 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 OR4C11Q6IEV9 310 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 SLC35E3Q7Z769 313 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 PPP1R3BQ86XI6 285 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 EXD3Q8N9H8 876 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 MFSD9Q8NBP5 474 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 PCSK9Q8NBP7 692 aaKnown RBP7.3□□□□□ -1.24
ATG4A-201ENST00000343524 RCBTB1Q8NDN9 531 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 OR13C3Q8NGS6 347 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 ZNF563Q8TA94 476 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 POC1BQ8TC44 478 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 TSEN15Q8WW01 171 aaKnown RBP7.3□□□□□ -1.24
ATG4A-201ENST00000343524 MCHR2Q969V1 340 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 KTI12Q96EK9 354 aaPredicted RBP7.3□□□□□ -1.24
ATG4A-201ENST00000343524 TVP23CQ96ET8 276 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 WFIKKN1Q96NZ8 548 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 NUDT16L1Q9BRJ7 211 aaKnown RBP7.3□□□□□ -1.24
ATG4A-201ENST00000343524 PRDM7Q9NQW5 492 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 SPHK2Q9NRA0 654 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 C20orf141Q9NUB4 165 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 PUS1Q9Y606 427 aaKnown RBP eCLIP7.3□□□□□ -1.24
ATG4A-201ENST00000343524 TMEM14AQ9Y6G1 99 aa7.3□□□□□ -1.24
ATG4A-201ENST00000343524 TRAV8-7A0A075B6U6 113 aa7.29□□□□□ -1.24
ATG4A-201ENST00000343524 TRAV27A0A087WT01 109 aa7.29□□□□□ -1.24
ATG4A-201ENST00000343524 SLC38A8A6NNN8 435 aa7.29□□□□□ -1.24
ATG4A-201ENST00000343524 RTCAO00442 366 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms