RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 PSMB6P28072 239 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 AQP1P29972 269 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 FMO3P31513 532 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 GPX4P36969 197 aaPredicted RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 PMELP40967 661 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 VDAC2P45880 294 aaPredicted RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 CSNK1DP48730 415 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 RAB7AP51149 207 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 PLTPP55058 493 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 DLX1P56177 255 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 OR2B6P58173 313 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 TAS2R39P59534 338 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 UBE2KP61086 200 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 NUTF2P61970 127 aaKnown RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 TSPAN5P62079 268 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 ST3GAL4Q11206 333 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 ARFRP1Q13795 201 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 OR4D1Q15615 310 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 CCNJQ5T5M9 372 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 CPTPQ5TA50 214 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 FAHD1Q6P587 224 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 ZNF620Q6ZNG0 422 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 TPGS1Q6ZTW0 290 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 MBOAT2Q6ZWT7 520 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 MOB1BQ7L9L4 216 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 CRLF3Q8IUI8 442 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 CBLN2Q8IUK8 224 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 NELFCDQ8IXH7 590 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 C6orf223Q8N319 242 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 TMEM252Q8N6L7 170 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 WDR31Q8NA23 367 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 HSD17B11Q8NBQ5 300 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 NECAP1Q8NC96 275 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 OR2AP1Q8NGE2 309 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 OR1N2Q8NGR9 330 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 OR8U1Q8NH10 309 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 FANK1Q8TC84 345 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 OR51E1Q8TCB6 317 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 DOK4Q8TEW6 326 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 PHF10Q8WUB8 498 aaKnown RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 APH1BQ8WW43 257 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 IFT81Q8WYA0 676 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 ITFG2Q969R8 447 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 TMEM230Q96A57 120 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 RCN3Q96D15 328 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 ZNF514Q96K75 400 aaPredicted RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 FAM210AQ96ND0 272 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 ZFP3Q96NJ6 502 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 SERPINB11Q96P15 392 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 SCGB3A2Q96PL1 93 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 SMIM14Q96QK8 99 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 CIB1Q99828 191 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 C7orf50Q9BRJ6 194 aaKnown RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 AGMATQ9BSE5 352 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 COPS4Q9BT78 406 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 UPF3BQ9BZI7 483 aaKnown RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 POLR2J2Q9GZM3 115 aaKnown RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 DRC3Q9H069 523 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 POLR2J3Q9H1A7 115 aaKnown RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 SAV1Q9H4B6 383 aaPredicted RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 RPF2Q9H7B2 306 aaKnown RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 SLC38A10Q9HBR0 1119 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 KCNJ16Q9NPI9 418 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 ZNF331Q9NQX6 463 aaPredicted RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 RMND1Q9NWS8 449 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 SDHAF2Q9NX18 166 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 SLC39A1Q9NY26 324 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 CLEC2DQ9UHP7 191 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 NXT1Q9UKK6 140 aaKnown RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 TSSC4Q9Y5U2 329 aaPredicted RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 KCNE3Q9Y6H6 103 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 URGCP-MRPS24S4R325 110 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 COL22A1Q8NFW1 1626 aaPredicted RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 MROH7Q68CQ1 1323 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 USP42Q9H9J4 1324 aaKnown RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 MAPK8IP3Q9UPT6 1336 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 SBNO1A3KN83 1393 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 TRAV8-7A0A075B6U6 113 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 A0A0A6YYD5 115 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 A0A0A6YYH2 397 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 ANKRD20A5PA0PJZ0 165 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 TVP23AA6NH52 213 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 A6NJ64 397 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 MKRN2OSH3BPM6 223 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 DFFAO00273 331 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 GABRPO00591 440 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 NME4O00746 187 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 SNAI2O43623 268 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 GATCO43716 136 aaKnown RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 CDC40O60508 579 aaKnown RBP eCLIP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 ZNF780AO75290 641 aaPredicted RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 TRAPPC6AO75865 159 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 SRP72O76094 671 aaKnown RBP1.3□□□□□ -2.2
XRCC4-202ENST00000338635 MYO1DO94832 1006 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 TIMP1P01033 207 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 SEMG1P04279 462 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 CD5P06127 495 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 CSF3P09919 207 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 GKN3PP0CG01 181 aa1.3□□□□□ -2.2
XRCC4-202ENST00000338635 FOLR1P15328 257 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms