RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RAD51DO75771 328 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 CNOT4O95628 575 aaKnown RBP12.82□□□□□ -0.36
CBX3-201ENST00000337620 CRHP06850 196 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 GLI4P10075 376 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 RAB3BP20337 219 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 CRYGSP22914 178 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 RBPJQ06330 500 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 TCF7L1Q9HCS4 588 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 SLC17A5Q9NRA2 495 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 AK6Q9Y3D8 172 aaKnown RBP12.82□□□□□ -0.36
CBX3-201ENST00000337620 A3GALT2U3KPV4 340 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 TRBV5-7A0A0A0MS05 114 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 E9PLN8 166 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 CGAP01215 116 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 RAF1P04049 648 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 CD2P06729 351 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 SFTPCP11686 197 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 ARR3P36575 388 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 PMPCAQ10713 525 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 TSC22D1Q15714 1073 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 EIF2S3LQ2VIR3 472 aaKnown RBP12.82□□□□□ -0.36
CBX3-201ENST00000337620 TBRG1Q3YBR2 411 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 TMEM53Q6P2H8 277 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 PRSS45Q7RTY3 260 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 THRSPQ92748 146 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 ZFP3Q96NJ6 502 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 SLITRK2Q9H156 845 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 NOX3Q9HBY0 568 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 ZNF835Q9Y2P0 537 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 INTS1Q8N201 2190 aaKnown RBP12.81□□□□□ -0.36
CBX3-201ENST00000337620 A0A1B0GVI7 797 aa12.81□□□□□ -0.36
CBX3-201ENST00000337620 C5orf63A6NC05 138 aa12.81□□□□□ -0.36
CBX3-201ENST00000337620 CTDSP2O14595 271 aa12.81□□□□□ -0.36
CBX3-201ENST00000337620 RGS5O15539 181 aa12.81□□□□□ -0.36
CBX3-201ENST00000337620 UBL3O95164 117 aa12.81□□□□□ -0.36
CBX3-201ENST00000337620 EDN3P14138 238 aa12.81□□□□□ -0.36
CBX3-201ENST00000337620 APEX1P27695 318 aaKnown RBP12.81□□□□□ -0.36
CBX3-201ENST00000337620 CEACAM8P31997 349 aaPredicted RBP12.81□□□□□ -0.36
CBX3-201ENST00000337620 S100A5P33763 92 aa12.81□□□□□ -0.36
CBX3-201ENST00000337620 MOGQ16653 247 aa12.81□□□□□ -0.36
CBX3-201ENST00000337620 DRAM2Q6UX65 266 aa12.81□□□□□ -0.36
CBX3-201ENST00000337620 ZNF433Q8N7K0 673 aaPredicted RBP12.81□□□□□ -0.36
CBX3-201ENST00000337620 GPR84Q9NQS5 396 aa12.81□□□□□ -0.36
CBX3-201ENST00000337620 CRNNQ9UBG3 495 aaPredicted RBP12.81□□□□□ -0.36
CBX3-201ENST00000337620 SPTA1P02549 2419 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 A0A075B6Q4 140 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 TRAV8-7A0A075B6U6 113 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 LMX1BO60663 402 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 LCATP04180 440 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 MAS1P04201 325 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 CCNOP22674 350 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 HGFACQ04756 655 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 PLP2Q04941 152 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 GSG1Q2KHT4 349 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 IDNKQ5T6J7 187 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 NANOS1Q8WY41 292 aaKnown RBP12.8□□□□□ -0.36
CBX3-201ENST00000337620 AP3S1Q92572 193 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 FAM71F1Q96KD3 344 aaPredicted RBP12.8□□□□□ -0.36
CBX3-201ENST00000337620 SMURF1Q9HCE7 757 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 A0A1B0GTI1 187 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 A0A1W2PR80 420 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 A6NIN4 97 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 PDCD5O14737 125 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 UBE2NP61088 152 aaKnown RBP12.8□□□□□ -0.36
CBX3-201ENST00000337620 GABRA6Q16445 453 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 SNAI3Q3KNW1 292 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 SLC25A35Q3KQZ1 300 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 CEP78Q5JTW2 689 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 SFXN4Q6P4A7 337 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 STAC2Q6ZMT1 411 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 GABRG1Q8N1C3 465 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 FGGYQ96C11 551 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 SOX7Q9BT81 388 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 DAPK2Q9UIK4 370 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 PEX16Q9Y5Y5 336 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 ATRXP46100 2492 aa12.8□□□□□ -0.36
CBX3-201ENST00000337620 TPRP12270 2363 aaKnown RBP12.79□□□□□ -0.36
CBX3-201ENST00000337620 A0A0G2JK05 382 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 IQCMA0A1B0GVH7 501 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 CCL2P13500 99 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 STOMP27105 288 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 KRTAP27-1Q3LI81 207 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 BEND4Q6ZU67 534 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 DPPA2Q7Z7J5 298 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 MDP1Q86V88 176 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 CXorf67Q86X51 503 aaPredicted RBP12.79□□□□□ -0.36
CBX3-201ENST00000337620 OR52H1Q8NGJ2 320 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 SFXN3Q9BWM7 321 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 OR10A2Q9H208 303 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 ZNF275Q9NSD4 429 aaPredicted RBP12.79□□□□□ -0.36
CBX3-201ENST00000337620 B3GNT2Q9NY97 397 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 COMMD3Q9UBI1 195 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 CKLFQ9UBR5 152 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 LOC100509620A0A075B734 347 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 C5orf49A4QMS7 147 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 NOTOA8MTQ0 251 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 SLC2A2P11168 524 aaPredicted RBP12.79□□□□□ -0.36
CBX3-201ENST00000337620 COX5AP20674 150 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 GNALP38405 381 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 LINC00299Q6ZSB3 139 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms