RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 CXCL3P19876 107 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 MAPK3P27361 379 aaPredicted RBP11.13□□□□□ -0.63
LIMK1-201ENST00000336180 OR3A3P47888 321 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 CSNK1A1P48729 337 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 VEGFCP49767 419 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 RAB11BQ15907 218 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 PLA1AQ53H76 456 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 TEX30Q5JUR7 227 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 SFRP5Q5T4F7 317 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 NHLRC1Q6VVB1 395 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 GTPBP8Q8N3Z3 284 aaPredicted RBP11.13□□□□□ -0.63
LIMK1-201ENST00000336180 WDR89Q96FK6 387 aaPredicted RBP11.13□□□□□ -0.63
LIMK1-201ENST00000336180 HHLA2Q9UM44 414 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 MYO7BQ6PIF6 2116 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 CUL9Q8IWT3 2517 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 NBEAQ8NFP9 2946 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 TMEM272A0A1B0GTI8 110 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 AQP7P3A6NL99 342 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 ALDOBP05062 364 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 GLAP06280 429 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 ANXA7P20073 488 aaKnown RBP11.13□□□□□ -0.63
LIMK1-201ENST00000336180 CYB561P49447 251 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 ROM1Q03395 351 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 SLC22A6Q4U2R8 563 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 FAM109AQ8N4B1 249 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 OR52B4Q8NGK2 314 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 HAVCR2Q8TDQ0 301 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 STEAP1Q9UHE8 339 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 CSAG2Q9Y5P2 127 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 MUC6Q6W4X9 2439 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 HMX3A6NHT5 357 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 LRRC3CA6NJW4 275 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 B4E171 279 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 ARPC1BO15143 372 aaKnown RBP11.12□□□□□ -0.63
LIMK1-201ENST00000336180 HPXP02790 462 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 CD2P06729 351 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 HOXB1P14653 301 aaPredicted RBP11.12□□□□□ -0.63
LIMK1-201ENST00000336180 B4GALT1P15291 398 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 DSCR4P56555 118 aaPredicted RBP11.12□□□□□ -0.63
LIMK1-201ENST00000336180 OR1J2Q8NGS2 313 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 OR2AE1Q8NHA4 323 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 ADAMTS14Q8WXS8 1223 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 AKAP1Q92667 903 aaKnown RBP eCLIP11.12□□□□□ -0.63
LIMK1-201ENST00000336180 HRASLSQ9HDD0 168 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 GPR84Q9NQS5 396 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 ATMQ13315 3056 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 M0QYG6 137 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 PHYHO14832 338 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 SFTPCP11686 197 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 CLDN15P56746 228 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 GABREP78334 506 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 SLC35A1P78382 337 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 PCGF3Q3KNV8 242 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 Q5BKY6 102 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 SLC25A25Q6KCM7 469 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 C5orf46Q6UWT4 87 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 CREB3L2Q70SY1 520 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 CHST4Q8NCG5 386 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 OR9K2Q8NGE7 335 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 OR8B12Q8NGG6 310 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 OR56B4Q8NH76 319 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 GRPEL2Q8TAA5 225 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 RNF133Q8WVZ7 376 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 TINAGL1Q9GZM7 467 aaPredicted RBP11.12□□□□□ -0.63
LIMK1-201ENST00000336180 SLC6A15Q9H2J7 730 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 DPAGT1Q9H3H5 408 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 ZCCHC4Q9H5U6 513 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 FAM206AQ9NX38 181 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 GLTPQ9NZD2 209 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 CKLFQ9UBR5 152 aa11.12□□□□□ -0.63
LIMK1-201ENST00000336180 CENPXA8MT69 81 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 KRT33AO76009 404 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 GP1BAP07359 652 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 CX3CR1P49238 355 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 MMP15P51511 669 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 SLC25A53Q5H9E4 307 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 OR10K1Q8NGX5 313 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 SMIM4Q8WVI0 70 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 FCAMRQ8WWV6 532 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 BANF2Q9H503 90 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 CCDC187A0A096LP49 1063 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 IGLV3-32A0A0A0MS00 114 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 TMEM235A6NFC5 223 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 ZNF98A6NK75 572 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 SRSF10O75494 262 aaKnown RBP11.11□□□□□ -0.63
LIMK1-201ENST00000336180 CTAG2O75638 210 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 HLA-DMAP28067 261 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 EIF1P41567 113 aaKnown RBP11.11□□□□□ -0.63
LIMK1-201ENST00000336180 CCR9P51686 369 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 CARD18P57730 90 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 KLF9Q13886 244 aaPredicted RBP11.11□□□□□ -0.63
LIMK1-201ENST00000336180 THEM4Q5T1C6 240 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 DUSP18Q8NEJ0 188 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 OR4S1Q8NGB4 309 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 OR10D3Q8NH80 312 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 AKR7LQ8NHP1 331 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 MARVELD1Q9BSK0 173 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 ULBP2Q9BZM5 246 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 CNTD2Q9H8S5 307 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 PARD6AQ9NPB6 346 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms