RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SEZ6L2Q6UXD5 910 aa15.4■□□□□ 0.06
DDX28-201ENST00000332395 DBX2Q6ZNG2 339 aa15.4■□□□□ 0.06
DDX28-201ENST00000332395 OR51E1Q8TCB6 317 aa15.4■□□□□ 0.06
DDX28-201ENST00000332395 CNTD2Q9H8S5 307 aa15.4■□□□□ 0.06
DDX28-201ENST00000332395 PNRC2Q9NPJ4 139 aaKnown RBP15.4■□□□□ 0.06
DDX28-201ENST00000332395 TCFL5Q9UL49 500 aa15.4■□□□□ 0.06
DDX28-201ENST00000332395 NPTNQ9Y639 398 aa15.4■□□□□ 0.06
DDX28-201ENST00000332395 IGHV3-15A0A0B4J1V0 119 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 A0A1B0GTI1 187 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 CBR3O75828 277 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 CD63P08962 238 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 ZNF883P0CG24 379 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 AKAIN1P0CW23 69 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 NR2C1P13056 603 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 ZNF17P17021 662 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 CTRB1P17538 263 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 EXOSC2Q13868 293 aaKnown RBP15.39■□□□□ 0.05
DDX28-201ENST00000332395 CTRB2Q6GPI1 263 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.39■□□□□ 0.05
DDX28-201ENST00000332395 CLEC1AQ8NC01 280 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 OR1M1Q8NGA1 313 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 OR52N4Q8NGI2 321 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 PTX4Q96A99 478 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 TMEM41AQ96HV5 264 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 ZNF436Q9C0F3 470 aaPredicted RBP15.39■□□□□ 0.05
DDX28-201ENST00000332395 TMEM138Q9NPI0 162 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 NPDC1Q9NQX5 325 aaPredicted RBP15.39■□□□□ 0.05
DDX28-201ENST00000332395 DLL4Q9NR61 685 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 A0A0A6YYH2 397 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 A6NJ64 397 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 PYCARD-AS1I3L0S3 204 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 SULT1C2O00338 296 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 IFNA7P01567 189 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 FCER2P06734 321 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 LPLP06858 475 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 SLC2A1P11166 492 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 CSNK1A1P48729 337 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 ZNF121P58317 390 aaPredicted RBP15.39■□□□□ 0.05
DDX28-201ENST00000332395 ACTBP60709 375 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 ACTG1P63261 375 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 LGALSLQ3ZCW2 172 aaPredicted RBP15.39■□□□□ 0.05
DDX28-201ENST00000332395 OR5D14Q8NGL3 314 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 SEH1LQ96EE3 360 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 SGCZQ96LD1 299 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 NECAB3Q96P71 396 aaPredicted RBP15.39■□□□□ 0.05
DDX28-201ENST00000332395 ZNF385AQ96PM9 386 aaKnown RBP15.39■□□□□ 0.05
DDX28-201ENST00000332395 UCN2Q96RP3 112 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 GINS4Q9BRT9 223 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 DPCDQ9BVM2 203 aaPredicted RBP15.39■□□□□ 0.05
DDX28-201ENST00000332395 ARRDC1-AS1Q9H2J1 176 aa15.39■□□□□ 0.05
DDX28-201ENST00000332395 BET1O15155 118 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 VAMP5O95183 116 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 CD3DP04234 171 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 IL5P05113 134 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 TCN2P20062 427 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 SELENOPP49908 381 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 CAPZA1P52907 286 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 CSNK2A1P68400 391 aaPredicted RBP15.38■□□□□ 0.05
DDX28-201ENST00000332395 Q0VFX4 171 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 PMPCAQ10713 525 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 MOGAT2Q3SYC2 334 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 OR8B12Q8NGG6 310 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 OR6N1Q8NGY5 312 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 ZNF69Q9UC07 566 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 SCP2D1Q9UJQ7 156 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 PMS2P1A4D2B8 440 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 NPIPA2E9PIF3 369 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 NPIPA3F8WFD2 350 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 ICAM2P13598 275 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 CPN1P15169 458 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 RAB3AP20336 220 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 RAB6AP20340 208 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 RAC1P63000 192 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 CCDC157Q569K6 752 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 ZNF529Q6P280 563 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 C6orf15Q6UXA7 325 aaPredicted RBP15.38■□□□□ 0.05
DDX28-201ENST00000332395 TIPARPQ7Z3E1 657 aaKnown RBP15.38■□□□□ 0.05
DDX28-201ENST00000332395 ABHD12BQ7Z5M8 362 aaPredicted RBP15.38■□□□□ 0.05
DDX28-201ENST00000332395 COMMD2Q86X83 199 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 SLC22A24Q8N4F4 322 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 ZBTB44Q8NCP5 570 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 OR13C9Q8NGT0 318 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 OR8S1Q8NH09 359 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 CT55Q8WUE5 264 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 DVL3Q92997 716 aaPredicted RBP15.38■□□□□ 0.05
DDX28-201ENST00000332395 PIGQQ9BRB3 760 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 NAA11Q9BSU3 229 aaPredicted RBP15.38■□□□□ 0.05
DDX28-201ENST00000332395 ZNF416Q9BWM5 594 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 METTL17Q9H7H0 456 aaPredicted RBP15.38■□□□□ 0.05
DDX28-201ENST00000332395 SCPEP1Q9HB40 452 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 GPN1Q9HCN4 374 aaPredicted RBP15.38■□□□□ 0.05
DDX28-201ENST00000332395 COQ3Q9NZJ6 369 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 UBQLN2Q9UHD9 624 aa15.38■□□□□ 0.05
DDX28-201ENST00000332395 SDK2Q58EX2 2172 aa15.37■□□□□ 0.05
DDX28-201ENST00000332395 A0A0J9YW62 118 aa15.37■□□□□ 0.05
DDX28-201ENST00000332395 TRIM77I1YAP6 450 aa15.37■□□□□ 0.05
DDX28-201ENST00000332395 TNFSF11O14788 317 aa15.37■□□□□ 0.05
DDX28-201ENST00000332395 CREBL2O60519 120 aaPredicted RBP15.37■□□□□ 0.05
DDX28-201ENST00000332395 MPC2O95563 127 aa15.37■□□□□ 0.05
DDX28-201ENST00000332395 CX3CR1P49238 355 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms