RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 ADAT3Q96EY9 351 aaPredicted RBP12.31□□□□□ -0.44
TRAIP-201ENST00000331456 ATG5Q9H1Y0 275 aa12.31□□□□□ -0.44
TRAIP-201ENST00000331456 SLC6A15Q9H2J7 730 aa12.31□□□□□ -0.44
TRAIP-201ENST00000331456 ASCL3Q9NQ33 180 aa12.31□□□□□ -0.44
TRAIP-201ENST00000331456 GPR84Q9NQS5 396 aa12.31□□□□□ -0.44
TRAIP-201ENST00000331456 EMC3Q9P0I2 261 aa12.31□□□□□ -0.44
TRAIP-201ENST00000331456 KNTC1P50748 2209 aa12.31□□□□□ -0.44
TRAIP-201ENST00000331456 NAP1L6A6NFF2 107 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 DHFRP00374 187 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 TMIGD3P0DMS9 266 aaPredicted RBP12.3□□□□□ -0.44
TRAIP-201ENST00000331456 ZNF708P17019 499 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 CCL1P22362 96 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 BTCP35070 178 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 SLC6A9P48067 706 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 EFNB2P52799 333 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 CLDN18P56856 261 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 PPIAP62937 165 aaKnown RBP12.3□□□□□ -0.44
TRAIP-201ENST00000331456 PLA2G7Q13093 441 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 BCL2A1Q16548 175 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 CCDC92Q53HC0 331 aaPredicted RBP12.3□□□□□ -0.44
TRAIP-201ENST00000331456 IGF2-ASQ6U949 168 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 ZNF813Q6ZN06 617 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 PGAP1Q75T13 922 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 SLC22A24Q8N4F4 322 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 LRFN3Q9BTN0 628 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 TMEM38BQ9NVV0 291 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 PLEK2Q9NYT0 353 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 MCTS1Q9ULC4 181 aaKnown RBP12.3□□□□□ -0.44
TRAIP-201ENST00000331456 RBMX2Q9Y388 322 aaKnown RBP12.3□□□□□ -0.44
TRAIP-201ENST00000331456 ALG5Q9Y673 324 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 AHCTF1Q8WYP5 2266 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 IGKV3D-15A0A087WSY6 115 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 A0A0B4J293 547 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 F5H5K5 113 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 SCRN3Q0VDG4 424 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 ECH1Q13011 328 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 RAB35Q15286 201 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 VASH2Q86V25 355 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 TMEM178AQ8NBL3 297 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 OR6F1Q8NGZ6 308 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 ABHD3Q8WU67 409 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 HAS2Q92819 552 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 GCDHQ92947 438 aaPredicted RBP12.3□□□□□ -0.44
TRAIP-201ENST00000331456 PTX4Q96A99 478 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 ZNF837Q96EG3 531 aaPredicted RBP12.3□□□□□ -0.44
TRAIP-201ENST00000331456 FAM71F1Q96KD3 344 aaPredicted RBP12.3□□□□□ -0.44
TRAIP-201ENST00000331456 UQCC2Q9BRT2 126 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 CACNG6Q9BXT2 260 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 FAM86C1Q9NVL1 165 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 PARPBPQ9NWS1 579 aa12.3□□□□□ -0.44
TRAIP-201ENST00000331456 NOSIPQ9Y314 301 aaKnown RBP12.3□□□□□ -0.44
TRAIP-201ENST00000331456 TRAV18A0A075B6X5 111 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 SGCEO43556 437 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 MT-ND4P03905 459 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 TCRBP04435 133 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 GABRA1P14867 456 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 GIFP27352 417 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 NTF4P34130 210 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 SLC10A1Q14973 349 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 GFOD2Q3B7J2 385 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 TBRG1Q3YBR2 411 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 ZNF766Q5HY98 468 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 ZNF529Q6P280 563 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 ZFP62Q8NB50 900 aaPredicted RBP12.29□□□□□ -0.44
TRAIP-201ENST00000331456 CCDC54Q8NEL0 328 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 OR13C9Q8NGT0 318 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 SLC7A6Q92536 515 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 FBXO17Q96EF6 278 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 ALKBH3Q96Q83 286 aaPredicted RBP12.29□□□□□ -0.44
TRAIP-201ENST00000331456 FOXB1Q99853 325 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 PRRG4Q9BZD6 226 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 METTL17Q9H7H0 456 aaPredicted RBP12.29□□□□□ -0.44
TRAIP-201ENST00000331456 GPR35Q9HC97 309 aa12.29□□□□□ -0.44
TRAIP-201ENST00000331456 A0A0A6YYH2 397 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 A0A0U1RQV5 110 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 ANKRD20A5PA0PJZ0 165 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 A6NJ64 397 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 M0R135 149 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 MRPL33O75394 65 aaKnown RBP12.28□□□□□ -0.44
TRAIP-201ENST00000331456 RBBP9O75884 186 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 ACTL6AO96019 429 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 PCBD1P61457 104 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 CEACAM16Q2WEN9 425 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 CHMP1BQ7LBR1 199 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 FAM109AQ8N4B1 249 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 SCMH1Q96GD3 660 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 ZNF799Q96GE5 643 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 IRF2BPLQ9H1B7 796 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 KCNK15Q9H427 330 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 ACKR4Q9NPB9 350 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 NUDT15Q9NV35 164 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 ZNF319Q9P2F9 582 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 KLK11Q9UBX7 282 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 PHF3Q92576 2039 aaKnown RBP12.28□□□□□ -0.44
TRAIP-201ENST00000331456 CIB4A0PJX0 185 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 OR6C65A6NJZ3 312 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 RAB6AP20340 208 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 OTX1P32242 354 aaPredicted RBP12.28□□□□□ -0.44
TRAIP-201ENST00000331456 NBL1P41271 181 aa12.28□□□□□ -0.44
TRAIP-201ENST00000331456 ATAD3CQ5T2N8 411 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms