RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 DVL1P1P54792 670 aaPredicted RBP16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 RPL18Q07020 188 aaKnown RBP16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 EMC4Q5J8M3 183 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 OR2B11Q5JQS5 317 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 WDSUB1Q8N9V3 476 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 OR1E3Q8WZA6 343 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 SLC25A44Q96H78 314 aaPredicted RBP16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 OR5B2Q96R09 309 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 SLC5A7Q9GZV3 580 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 MMP25Q9NPA2 562 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 CYP8B1Q9UNU6 501 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 MRPS17Q9Y2R5 130 aaKnown RBP16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 HS3ST3A1Q9Y663 406 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 SERINC4A6NH21 518 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 ZNF729A6NN14 1252 aaPredicted RBP16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 C10orf142B7Z368 130 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 SERPINA5P05154 406 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 ACKR3P25106 362 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 TAS2R31P59538 309 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 YPEL5P62699 121 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 SPOCK1Q08629 439 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 AWAT1Q58HT5 328 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 TEX30Q5JUR7 227 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 RD3Q7Z3Z2 195 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 LIPHQ8WWY8 451 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 ANKRD9Q96BM1 317 aaPredicted RBP16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 CMBLQ96DG6 245 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 GDF2Q9UK05 429 aaPredicted RBP16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 DMRT1Q9Y5R6 373 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 POMT1Q9Y6A1 747 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 ASAH2BP0C7U1 165 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 RAB5AP20339 215 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 KRBOX4Q5JUW0 171 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 ZNF679Q8IYX0 411 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 MARCH1Q8TCQ1 289 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 PTX4Q96A99 478 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 ISOC2Q96AB3 205 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 TMPRSS5Q9H3S3 457 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 PDE7BQ9NP56 450 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 LRIT1Q9P2V4 623 aa16.19■□□□□ 0.18
CLSTN3-202ENST00000331148 hCG_1809904A0A1W2PP81 198 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 A0A1W2PR64 198 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 A0A1W2PRV1 198 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 AP4M1O00189 453 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 TNFRSF10CO14798 259 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 PPIHO43447 177 aaKnown RBP16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 OR10H2O60403 315 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 IGHV4-34P06331 123 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 S1PR1P21453 382 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 GLP1RP43220 463 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 CCR5P51681 352 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 HMGN3Q15651 99 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 KIAA0895LQ68EN5 471 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 RPL7L1Q6DKI1 246 aaKnown RBP16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 EIF5AL1Q6IS14 154 aaKnown RBP16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 NPSR1Q6W5P4 371 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 TSTD1Q8NFU3 115 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 FLVCR1-AS1Q8TAF5 88 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 SECTM1Q8WVN6 248 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 TSACCQ96A04 125 aaPredicted RBP16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 GUCD1Q96NT3 240 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 SPSB2Q99619 263 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 TUBA4BQ9H853 241 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 TAF9BQ9HBM6 251 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 HEBP2Q9Y5Z4 205 aa16.18■□□□□ 0.18
CLSTN3-202ENST00000331148 RAB27BO00194 218 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 ADAP1O75689 374 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 IFNA6P05013 189 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 SNRNP70P08621 437 aaKnown RBP16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 RAB6AP20340 208 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 ID4P47928 161 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 SULT1A2P50226 295 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 EIF5AP63241 154 aaKnown RBP16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 NNATQ16517 81 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 Q6ZSR6 202 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 TAF8Q7Z7C8 310 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 ATG4DQ86TL0 474 aaPredicted RBP16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 ZNF761Q86XN6 746 aaPredicted RBP16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 OR4D6Q8NGJ1 314 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 OR4C3Q8NH37 302 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 ASB17Q8WXJ9 295 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 FOXN4Q96NZ1 517 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 PARP11Q9NR21 331 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 WNT16Q9UBV4 365 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 C7orf77A4D0Y5 90 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 HLA-DQA2P01906 255 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 CSTBP04080 98 aaKnown RBP16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 RD3LP0DJH9 198 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 LAP3P28838 519 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 C1orf100Q5SVJ3 147 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 HOGA1Q86XE5 327 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 CA13Q8N1Q1 262 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 CHST4Q8NCG5 386 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 SHDQ96IW2 340 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 VSTM2LQ96N03 204 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 SRMSQ9H3Y6 488 aa16.17■□□□□ 0.18
CLSTN3-202ENST00000331148 MEGF11A6BM72 1044 aa16.16■□□□□ 0.18
CLSTN3-202ENST00000331148 METTL21EPA6NDL7 271 aa16.16■□□□□ 0.18
CLSTN3-202ENST00000331148 EML2O95834 649 aa16.16■□□□□ 0.18
CLSTN3-202ENST00000331148 OR8U9P0C7N5 309 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms