RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 ATF6BQ99941 703 aa20.9■□□□□ 0.94
PPP4R4-202ENST00000328839 RPRD1BQ9NQG5 326 aaKnown RBP20.9■□□□□ 0.94
PPP4R4-202ENST00000328839 TNFRSF19Q9NS68 423 aa20.9■□□□□ 0.94
PPP4R4-202ENST00000328839 UFSP2Q9NUQ7 469 aa20.9■□□□□ 0.94
PPP4R4-202ENST00000328839 SAMD4AQ9UPU9 718 aaKnown RBP20.9■□□□□ 0.94
PPP4R4-202ENST00000328839 TRRAPQ9Y4A5 3859 aa20.9■□□□□ 0.94
PPP4R4-202ENST00000328839 GMNNO75496 209 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 LCATP04180 440 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 ACSM4P0C7M7 580 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 NOS3P29474 1203 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 SLC6A6P31641 620 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 FGF12P61328 243 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 RSPO1Q2MKA7 263 aaPredicted RBP20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 PRAMEF6Q5VXH4 476 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 SLC18B1Q6NT16 456 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 C16orf87Q6PH81 154 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 HACD2Q6Y1H2 254 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 DCDC5Q6ZRR9 648 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 FAM86B1Q8N7N1 296 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 OR4K13Q8NH42 304 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 SPRYD4Q8WW59 207 aaPredicted RBP20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 DACT3Q96B18 629 aaPredicted RBP20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 SLCO4A1Q96BD0 722 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 TMIGD2Q96BF3 282 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 IFT27Q9BW83 186 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 OR52D1Q9H346 318 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 MMADHCQ9H3L0 296 aaPredicted RBP20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 FN3KQ9H479 309 aa20.89■□□□□ 0.93
PPP4R4-202ENST00000328839 PHYHO14832 338 aa20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 FAM20BO75063 409 aa20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 HIST1H1CP16403 213 aaKnown RBP20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 GATA4P43694 442 aa20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 PSME3P61289 254 aa20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 TRAP1Q12931 704 aaKnown RBP20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 MAB21L1Q13394 359 aa20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 DEFB112Q30KQ8 113 aa20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 SLC36A3Q495N2 470 aa20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 GPR157Q5UAW9 335 aa20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 WDR25Q64LD2 544 aaPredicted RBP20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 COLCA1Q6ZS62 124 aa20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 PGAP1Q75T13 922 aa20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 NAA40Q86UY6 237 aa20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 FITM2Q8N6M3 262 aa20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 C7orf34Q96L11 122 aa20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 TECTBQ96PL2 329 aa20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 ABCD2Q9UBJ2 740 aa20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 TMCC3Q9ULS5 477 aa20.88■□□□□ 0.93
PPP4R4-202ENST00000328839 FSTL3O95633 263 aa20.87■□□□□ 0.93
PPP4R4-202ENST00000328839 RAD23AP54725 363 aa20.87■□□□□ 0.93
PPP4R4-202ENST00000328839 SPIBQ01892 262 aa20.87■□□□□ 0.93
PPP4R4-202ENST00000328839 ECH1Q13011 328 aa20.87■□□□□ 0.93
PPP4R4-202ENST00000328839 OR8G1Q15617 311 aa20.87■□□□□ 0.93
PPP4R4-202ENST00000328839 RFX4Q33E94 735 aa20.87■□□□□ 0.93
PPP4R4-202ENST00000328839 MRPL21Q7Z2W9 205 aaKnown RBP20.87■□□□□ 0.93
PPP4R4-202ENST00000328839 BOLLQ8N9W6 283 aaKnown RBP20.87■□□□□ 0.93
PPP4R4-202ENST00000328839 DCAF13Q9NV06 445 aaKnown RBP20.87■□□□□ 0.93
PPP4R4-202ENST00000328839 ADA2Q9NZK5 511 aa20.87■□□□□ 0.93
PPP4R4-202ENST00000328839 A0A1B0GWJ7 208 aa20.86■□□□□ 0.93
PPP4R4-202ENST00000328839 ENSAO43768 121 aaKnown RBP20.86■□□□□ 0.93
PPP4R4-202ENST00000328839 GADD45GO95257 159 aa20.86■□□□□ 0.93
PPP4R4-202ENST00000328839 CD200P41217 278 aa20.86■□□□□ 0.93
PPP4R4-202ENST00000328839 MPPED2Q15777 294 aa20.86■□□□□ 0.93
PPP4R4-202ENST00000328839 KRTAP27-1Q3LI81 207 aa20.86■□□□□ 0.93
PPP4R4-202ENST00000328839 RNF148Q8N7C7 305 aa20.86■□□□□ 0.93
PPP4R4-202ENST00000328839 CELF2-AS1Q8N7Q2 184 aa20.86■□□□□ 0.93
PPP4R4-202ENST00000328839 SDR9C7Q8NEX9 313 aa20.86■□□□□ 0.93
PPP4R4-202ENST00000328839 Q8TCH9 128 aa20.86■□□□□ 0.93
PPP4R4-202ENST00000328839 ERGIC1Q969X5 290 aa20.86■□□□□ 0.93
PPP4R4-202ENST00000328839 DHRS1Q96LJ7 313 aa20.86■□□□□ 0.93
PPP4R4-202ENST00000328839 PCGF1Q9BSM1 259 aa20.86■□□□□ 0.93
PPP4R4-202ENST00000328839 NSRP1Q9H0G5 558 aaKnown RBP20.86■□□□□ 0.93
PPP4R4-202ENST00000328839 SLITRK2Q9H156 845 aa20.86■□□□□ 0.93
PPP4R4-202ENST00000328839 CCDC134Q9H6E4 229 aa20.86■□□□□ 0.93
PPP4R4-202ENST00000328839 C22orf46C9J442 243 aa20.85■□□□□ 0.93
PPP4R4-202ENST00000328839 CA6P23280 308 aa20.85■□□□□ 0.93
PPP4R4-202ENST00000328839 TPTEP56180 551 aa20.85■□□□□ 0.93
PPP4R4-202ENST00000328839 SMIM11AP58511 58 aa20.85■□□□□ 0.93
PPP4R4-202ENST00000328839 HOXA4Q00056 320 aaPredicted RBP20.85■□□□□ 0.93
PPP4R4-202ENST00000328839 CLEC12AQ5QGZ9 265 aa20.85■□□□□ 0.93
PPP4R4-202ENST00000328839 RUSC1-AS1Q66K80 236 aa20.85■□□□□ 0.93
PPP4R4-202ENST00000328839 FUZQ9BT04 418 aa20.85■□□□□ 0.93
PPP4R4-202ENST00000328839 MARCH7Q9H992 704 aa20.85■□□□□ 0.93
PPP4R4-202ENST00000328839 SPAG4Q9NPE6 437 aa20.85■□□□□ 0.93
PPP4R4-202ENST00000328839 KIF17Q9P2E2 1029 aa20.85■□□□□ 0.93
PPP4R4-202ENST00000328839 CYB5R1Q9UHQ9 305 aa20.85■□□□□ 0.93
PPP4R4-202ENST00000328839 FAM181BA6NEQ2 426 aa20.84■□□□□ 0.93
PPP4R4-202ENST00000328839 ARPC3O15145 178 aa20.84■□□□□ 0.93
PPP4R4-202ENST00000328839 OR10H3O60404 316 aa20.84■□□□□ 0.93
PPP4R4-202ENST00000328839 CRYBA1P05813 215 aa20.84■□□□□ 0.93
PPP4R4-202ENST00000328839 GGT2P36268 569 aa20.84■□□□□ 0.93
PPP4R4-202ENST00000328839 DEFA6Q01524 100 aa20.84■□□□□ 0.93
PPP4R4-202ENST00000328839 SFRP4Q6FHJ7 346 aaPredicted RBP20.84■□□□□ 0.93
PPP4R4-202ENST00000328839 ZNF841Q6ZN19 808 aa20.84■□□□□ 0.93
PPP4R4-202ENST00000328839 ZBTB46Q86UZ6 589 aa20.84■□□□□ 0.93
PPP4R4-202ENST00000328839 ADAT1Q9BUB4 502 aaKnown RBP20.84■□□□□ 0.93
PPP4R4-202ENST00000328839 FN3KRPQ9HA64 309 aa20.84■□□□□ 0.93
PPP4R4-202ENST00000328839 PNRC2Q9NPJ4 139 aaKnown RBP20.84■□□□□ 0.93
PPP4R4-202ENST00000328839 RNF7Q9UBF6 113 aa20.84■□□□□ 0.93
PPP4R4-202ENST00000328839 OR6C68A6NDL8 312 aa20.83■□□□□ 0.93
PPP4R4-202ENST00000328839 SRRM5B3KS81 715 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms