RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 GPR119Q8TDV5 335 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 MN1Q10571 1320 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-201ENST00000328300 C5orf49A4QMS7 147 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 AQP8O94778 261 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 SLC2A10O95528 541 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 DHODHQ02127 395 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 SOWAHCQ53LP3 525 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-201ENST00000328300 ESCO2Q56NI9 601 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 STAC2Q6ZMT1 411 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 C10orf35Q96D05 121 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 KTI12Q96EK9 354 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-201ENST00000328300 CHRNA10Q9GZZ6 450 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 C20orf85Q9H1P6 137 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 AMDHD2Q9Y303 409 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 A0A1W2PPV4 95 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 A0A1W2PS29 197 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 ZNF705FA8MVS1 300 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-201ENST00000328300 KLK10O43240 276 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 CSF3P09919 207 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 ZNF705DP0CH99 300 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-201ENST00000328300 ZNF705BP0CI00 300 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-201ENST00000328300 HMGN3Q15651 99 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 OR6X1Q8NH79 312 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 CRLF2Q9HC73 371 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 RANGRFQ9HD47 186 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-201ENST00000328300 TMEFF2Q9UIK5 374 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-201ENST00000328300 AGPAT2O15120 278 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 APEX1P27695 318 aaKnown RBP10.28□□□□□ -0.76
COL4A5-201ENST00000328300 NUBP1P53384 320 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 SUB1P53999 127 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL4A5-201ENST00000328300 CAV3P56539 151 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 BTN1A1Q13410 526 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 GSG1Q2KHT4 349 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 STEAP3Q658P3 488 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 ZNF546Q86UE3 836 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 SCARF2Q96GP6 870 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-201ENST00000328300 ARPC5LQ9BPX5 153 aa10.28□□□□□ -0.76
COL4A5-201ENST00000328300 COLQQ9Y215 455 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-201ENST00000328300 IGHA2P01877 340 aa10.27□□□□□ -0.76
COL4A5-201ENST00000328300 SLC25A30Q5SVS4 291 aa10.27□□□□□ -0.76
COL4A5-201ENST00000328300 NRARPQ7Z6K4 114 aa10.27□□□□□ -0.76
COL4A5-201ENST00000328300 DNAJC5GQ8N7S2 189 aa10.27□□□□□ -0.76
COL4A5-201ENST00000328300 GPR32P1Q8NGA4 272 aa10.27□□□□□ -0.76
COL4A5-201ENST00000328300 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.27□□□□□ -0.76
COL4A5-201ENST00000328300 FAM212BQ9NTI7 297 aaPredicted RBP10.27□□□□□ -0.76
COL4A5-201ENST00000328300 IGHV5-10-1A0A0J9YXX1 117 aa10.27□□□□□ -0.76
COL4A5-201ENST00000328300 OR5H15A6NDH6 313 aa10.27□□□□□ -0.76
COL4A5-201ENST00000328300 CHATP28329 748 aa10.27□□□□□ -0.76
COL4A5-201ENST00000328300 RAC3P60763 192 aa10.27□□□□□ -0.76
COL4A5-201ENST00000328300 CEACAM16Q2WEN9 425 aa10.27□□□□□ -0.76
COL4A5-201ENST00000328300 OR11G2Q8NGC1 345 aa10.27□□□□□ -0.76
COL4A5-201ENST00000328300 DYNC2LI1Q8TCX1 351 aa10.27□□□□□ -0.76
COL4A5-201ENST00000328300 SECTM1Q8WVN6 248 aa10.27□□□□□ -0.76
COL4A5-201ENST00000328300 R4GN57 208 aa10.27□□□□□ -0.76
COL4A5-201ENST00000328300 SCN10AQ9Y5Y9 1956 aa10.27□□□□□ -0.76
COL4A5-201ENST00000328300 BATFQ16520 125 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 C8orf82Q6P1X6 216 aaPredicted RBP10.27□□□□□ -0.77
COL4A5-201ENST00000328300 LYSMD2Q8IV50 215 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 OR10G3Q8NGC4 313 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 OR5D18Q8NGL1 313 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 ICAM5Q9UMF0 924 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 SLCO1B1Q9Y6L6 691 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 TEX51A0A1B0GUA7 166 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 TSTD3H0UI37 97 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 TGM6O95932 706 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 HOXD4P09016 255 aaPredicted RBP10.27□□□□□ -0.77
COL4A5-201ENST00000328300 CLEC2LP0C7M8 214 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 RAB4BP61018 213 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 PDLIM3Q53GG5 364 aaPredicted RBP10.27□□□□□ -0.77
COL4A5-201ENST00000328300 EDARADDQ8WWZ3 215 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 FN3KRPQ9HA64 309 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 MBD1Q9UIS9 605 aaPredicted RBP10.27□□□□□ -0.77
COL4A5-201ENST00000328300 EXO1Q9UQ84 846 aaKnown RBP10.27□□□□□ -0.77
COL4A5-201ENST00000328300 TXNL1O43396 289 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 CELA2BP08218 269 aaPredicted RBP10.27□□□□□ -0.77
COL4A5-201ENST00000328300 HOXA1P49639 335 aaPredicted RBP10.27□□□□□ -0.77
COL4A5-201ENST00000328300 SLC9A3R2Q15599 337 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 UBE3DQ7Z6J8 389 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 C1orf174Q8IYL3 243 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 SLCO1C1Q9NYB5 712 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 SLC17A2O00624 439 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 BRICD5Q6PL45 260 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 NLRC3Q7RTR2 1065 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 TM4SF19Q96DZ7 209 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 LRRC3BQ96PB8 259 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 FAM60AQ9NP50 221 aa10.27□□□□□ -0.77
COL4A5-201ENST00000328300 POLR2AP24928 1970 aaKnown RBP10.26□□□□□ -0.77
COL4A5-201ENST00000328300 KIAA0100Q14667 2235 aaKnown RBP10.26□□□□□ -0.77
COL4A5-201ENST00000328300 TAAR5O14804 337 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 OIP5O43482 229 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 TLE4Q04727 773 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 UHRF2Q96PU4 802 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 C11orf54Q9H0W9 315 aaPredicted RBP10.26□□□□□ -0.77
COL4A5-201ENST00000328300 SLC6A13Q9NSD5 602 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 NUDT19A8MXV4 375 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 BHLHE40O14503 412 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 SPINT1O43278 529 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 HOXB5P09067 269 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 FAM122CQ6P4D5 195 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 FJX1Q86VR8 437 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms