RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SLC6A9P48067 706 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 CTF1Q16619 201 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 YIF1BQ5BJH7 314 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 ZNF704Q6ZNC4 412 aaPredicted RBP8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 GDPGP1Q6ZNW5 385 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 ZNF676Q8N7Q3 588 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 LILRB4Q8NHJ6 448 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 RGP1Q92546 391 aaPredicted RBP8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 RPL3LQ92901 407 aaKnown RBP8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 TMEM203Q969S6 136 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 DGCR14Q96DF8 476 aaKnown RBP8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 POM121L2Q96KW2 1035 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 SP140LQ9H930 580 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 BRD7Q9NPI1 651 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 CRNNQ9UBG3 495 aaPredicted RBP8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 SSR3Q9UNL2 185 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 TRDV1A0A1B0GX56 115 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 FAM90A27PA6NNH2 459 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 SERPINA3P01011 423 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 IGKV3-15P01624 115 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 TTRP02766 147 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 SLC2A1P11166 492 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 FABP5Q01469 135 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 HGFACQ04756 655 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 FAM57BQ71RH2 274 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 OR8B12Q8NGG6 310 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 PGAM5Q96HS1 289 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 CHCHD6Q9BRQ6 235 aa8.9□□□□□ -0.98
VIPAS39-201ENST00000327028 C5orf49A4QMS7 147 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 H3BMQ9 156 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 GABRPO00591 440 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 SC5DO75845 299 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 AGFG2O95081 481 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 IGLV1-44P01699 117 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 ISG15P05161 165 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 ACHEP22303 614 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 RPS11P62280 158 aaKnown RBP eCLIP8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 SSX8Q7RTT4 187 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 SLC30A7Q8NEW0 376 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 OR13C5Q8NGS8 318 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 ABHD4Q8TB40 342 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 PPP1R14AQ96A00 147 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 TRMT61AQ96FX7 289 aaKnown RBP8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 MS4A3Q96HJ5 214 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 EXOSC4Q9NPD3 245 aaKnown RBP8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 TRBV5-5A0A0J9YX44 114 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 LOC100506127A0A0U1RQW1 187 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 CELA3BP08861 270 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 NR4A1P22736 598 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 ANOS1P23352 680 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 FGF9P31371 208 aaPredicted RBP8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 IDH3GP51553 393 aaPredicted RBP8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 PPA1Q15181 289 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 TBC1D28Q2M2D7 210 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 C3orf36Q3SXR2 165 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 TMEM244Q5VVB8 128 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 TMEM91Q6ZNR0 172 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 COLCA1Q6ZS62 124 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 NAA40Q86UY6 237 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 MYPOPQ86VE0 399 aaPredicted RBP8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 OR52H1Q8NGJ2 320 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 OR1J2Q8NGS2 313 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 GPR148Q8TDV2 347 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 RNASE6Q93091 150 aaKnown RBP8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 C12orf43Q96C57 262 aaKnown RBP8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 MUCL1Q96DR8 90 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 C1QTNF5Q9BXJ0 243 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 OR10A2Q9H208 303 aa8.89□□□□□ -0.99
VIPAS39-201ENST00000327028 A0A0U1RQV5 110 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 LOC107986453A0A1B0GWG9 222 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 SLC22A1O15245 554 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 PPP3CBP16298 524 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 TAB1Q15750 504 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 ODF4Q2M2E3 257 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 ACSM3Q53FZ2 586 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 CA5BP1Q8WTZ4 195 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 THRSPQ92748 146 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 LRRC46Q96FV0 321 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 CENPOQ9BU64 300 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 TXNL4BQ9NX01 149 aaKnown RBP8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 ZNF319Q9P2F9 582 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 ZNF462Q96JM2 2506 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 FAM208BQ5VWN6 2430 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 P2RY10O00398 339 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 TBX1O43435 398 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 GATBO75879 557 aaKnown RBP8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 IGLV3-1P01715 115 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 LCATP04180 440 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 CCL2P13500 99 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 AGAP20933 346 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 CCL1P22362 96 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 NCS1P62166 190 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 LSM3P62310 102 aaKnown RBP8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 INSL4Q14641 139 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 SNAI3Q3KNW1 292 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 Q499Y3 187 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 PAMR1Q6UXH9 720 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 RDH10Q8IZV5 341 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 OR10AC1Q8NH08 325 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 CXorf56Q9H5V9 222 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms