RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 TRAV36DV7A0A075B6V5 113 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 RFPL4AA6NLU0 287 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 RFPL4AL1F8VTS6 287 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 ZNF85Q03923 595 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 PLA2G7Q13093 441 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 CLEC9AQ6UXN8 241 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 PPP1R3BQ86XI6 285 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 PUSL1Q8N0Z8 303 aaKnown RBP13.76□□□□□ -0.21
VARS2-201ENST00000321897 FAM24BQ8N5W8 94 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 SLC25A21Q9BQT8 299 aaPredicted RBP13.76□□□□□ -0.21
VARS2-201ENST00000321897 B9D1Q9UPM9 204 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 SLCO1B1Q9Y6L6 691 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 TMEM229AB2RXF0 380 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 H0YIG0 161 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 EPPINO95925 133 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 FOLR1P15328 257 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 IAH1Q2TAA2 248 aaPredicted RBP13.75□□□□□ -0.21
VARS2-201ENST00000321897 NKAIN1Q4KMZ8 207 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 PGAP1Q75T13 922 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 SLC16A9Q7RTY1 509 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 MARCH1Q8TCQ1 289 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 MIB2Q96AX9 1013 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 ZNF442Q9H7R0 627 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 NKX2-2O95096 273 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 IGKV1D-16P01601 117 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 ARG1P05089 322 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 PSMB6P28072 239 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 UBE2KP61086 200 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 BDH1Q02338 343 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 RIPPLY1Q0D2K3 151 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 KLF9Q13886 244 aaPredicted RBP13.75□□□□□ -0.21
VARS2-201ENST00000321897 GNMTQ14749 295 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 MEF2DQ14814 521 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 TAF9BQ9HBM6 251 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 HS3ST3A1Q9Y663 406 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 SNRNP200O75643 2136 aaKnown RBP13.75□□□□□ -0.21
VARS2-201ENST00000321897 TMEM218A2RU14 115 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 FAM221AA4D161 298 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 LRP3O75074 770 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 ZIC2O95409 532 aaPredicted RBP13.75□□□□□ -0.21
VARS2-201ENST00000321897 GNRHRP30968 328 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
VARS2-201ENST00000321897 RAB5CP51148 216 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 ARF1P84077 181 aaKnown RBP13.75□□□□□ -0.21
VARS2-201ENST00000321897 DHRS2Q13268 280 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 CLEC12BQ2HXU8 276 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 TMPRSS11FQ6ZWK6 438 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 HGDQ93099 445 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 ANKRD9Q96BM1 317 aaPredicted RBP13.75□□□□□ -0.21
VARS2-201ENST00000321897 SUCNR1Q9BXA5 334 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 UFSP2Q9NUQ7 469 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 FOXJ3Q9UPW0 622 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 A0A087WUJ7 227 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 LOC107986453A0A1B0GWG9 222 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 HSPA12AO43301 675 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 BCL2L11O43521 198 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 DBHP09172 617 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 EDN3P14138 238 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 FOSL1P15407 271 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 ANGPTL5Q86XS5 388 aa13.75□□□□□ -0.21
VARS2-201ENST00000321897 URM1Q9BTM9 101 aaKnown RBP13.75□□□□□ -0.21
VARS2-201ENST00000321897 LOC100289279A0A1B0GTE1 492 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 TMEM212A6NML5 194 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 CD27P26842 260 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 C11orf87Q6NUJ2 197 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 ARIH2OSQ8N7S6 290 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 SEMA6DQ8NFY4 1073 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 OR51E1Q8TCB6 317 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 CCDC74AQ96AQ1 378 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 HIST1H2AAQ96QV6 131 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 HTTP42858 3142 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 MFSD2BA6NFX1 497 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 BHLHE40O14503 412 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 GLP1RP43220 463 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 ELAVL1Q15717 326 aaKnown RBP13.74□□□□□ -0.21
VARS2-201ENST00000321897 HIST2H3PS2Q5TEC6 136 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 PTCRAQ6ISU1 281 aaPredicted RBP13.74□□□□□ -0.21
VARS2-201ENST00000321897 DND1Q8IYX4 353 aaKnown RBP13.74□□□□□ -0.21
VARS2-201ENST00000321897 SUMF1Q8NBK3 374 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 PCDHGA1Q9Y5H4 931 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 A0A0C4DFX4 3053 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 hCG_1809904A0A1W2PP81 198 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 A0A1W2PR64 198 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 A0A1W2PRV1 198 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 CYR61O00622 381 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 BET1O15155 118 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 NXPH3O95157 252 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 HOXB9P17482 250 aaPredicted RBP13.74□□□□□ -0.21
VARS2-201ENST00000321897 POLR2HP52434 150 aaKnown RBP13.74□□□□□ -0.21
VARS2-201ENST00000321897 HERV-K104P61576 105 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 PLEKHN1Q494U1 663 aaPredicted RBP13.74□□□□□ -0.21
VARS2-201ENST00000321897 ZNF660Q6AZW8 331 aaPredicted RBP13.74□□□□□ -0.21
VARS2-201ENST00000321897 RGS7BPQ6MZT1 257 aaPredicted RBP13.74□□□□□ -0.21
VARS2-201ENST00000321897 IL22RA1Q8N6P7 574 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 OR52A1Q9UKL2 312 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 SLC5A6Q9Y289 635 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 PTPRDP23468 1912 aa13.74□□□□□ -0.21
VARS2-201ENST00000321897 PATJQ8NI35 1801 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 METTL12A8MUP2 240 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 A8MVM7 634 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms