RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 FBXL19-AS1Q494R0 122 aa13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 DMRTC1Q5HYR2 192 aa13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 ADAM5Q6NVV9 412 aa13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 SEZ6L2Q6UXD5 910 aa13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 KCTD20Q7Z5Y7 419 aa13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 ZNF676Q8N7Q3 588 aa13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 OR51E1Q8TCB6 317 aa13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 C4orf45Q96LM5 186 aa13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 COG8Q96MW5 612 aa13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 HELZ2Q9BYK8 2649 aaKnown RBP13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 TRIM64CA6NLI5 447 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 ATP6V1G2-DDX39BF2Z307 99 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 SRSF10O75494 262 aaKnown RBP13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 NR1H2P55055 460 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 LSM3P62310 102 aaKnown RBP13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 RPS25P62851 125 aaKnown RBP13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 BSPH1Q075Z2 132 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 MLLT11Q13015 90 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 ALKBH1Q13686 389 aaKnown RBP13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 HLXQ14774 488 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 CDK5R1Q15078 307 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 RFPL4BQ6ZWI9 263 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 P2RY8Q86VZ1 359 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 FCGR1BQ92637 280 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 GHSRQ92847 366 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 ORAI1Q96D31 301 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 DCLRE1CQ96SD1 692 aaKnown RBP13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 POFUT1Q9H488 388 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 OBP2BQ9NPH6 170 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 G6PC2Q9NQR9 355 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 CRIM1Q9NZV1 1036 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 HEATR1Q9H583 2144 aaKnown RBP13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 ABCD4O14678 606 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 HOXB1P14653 301 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 OTX1P32242 354 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 ECH1Q13011 328 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 DEGS2Q6QHC5 323 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 DPPA2Q7Z7J5 298 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 CATSPERDQ86XM0 798 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 PHC2Q8IXK0 858 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 IL17RDQ8NFM7 739 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 OR5AK2Q8NH90 309 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 SMIM19Q96E16 107 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 FAM71F1Q96KD3 344 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 NAA50Q9GZZ1 169 aaKnown RBP13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 CSMD2Q7Z408 3487 aa13.32□□□□□ -0.28
PDLIM5-202ENST00000318007 IGHV2OR16-5A0A0B4J2B6 119 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 TTRP02766 147 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 EPXP11678 715 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 CD36P16671 472 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 SOX2P48431 317 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 RGS6P49758 472 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 NAAAQ02083 359 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 SYT6Q5T7P8 510 aaPredicted RBP13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 GPR107Q5VW38 600 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 RPL22L1Q6P5R6 122 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 GPR141Q7Z602 305 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 PLPPR2Q96GM1 343 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 BOD1Q96IK1 185 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 PGLYRP3Q96LB9 341 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 MYCBPQ99417 103 aaPredicted RBP13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 PTTG3PQ9NZH4 202 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 LOC100506127A0A0U1RQW1 187 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 DPRXA6NFQ7 191 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 CCDC160A6NGH7 325 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 PRSS44E7EML9 344 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 CCRL2O00421 344 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 GPRIN2O60269 458 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 LMX1BO60663 402 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 IGLV1-44P01699 117 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 AGAP20933 346 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 CD40P25942 277 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 TGFBR1P36897 503 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 RPL5P46777 297 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 MMP16P51512 607 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 GLYATL3Q5SZD4 288 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 SLC22A25Q6T423 547 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 DRAM2Q6UX65 266 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 RHOUQ7L0Q8 258 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 PRSS45Q7RTY3 260 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 BHLHE23Q8NDY6 225 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 SSC4DQ8WTU2 575 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 RPL3LQ92901 407 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 KCNS3Q9BQ31 491 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 WACQ9BTA9 647 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 OR51E2Q9H255 320 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 EXOSC4Q9NPD3 245 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 GPR84Q9NQS5 396 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 POU2F3Q9UKI9 436 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 STARD10Q9Y365 291 aa13.31□□□□□ -0.28
PDLIM5-202ENST00000318007 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.3□□□□□ -0.28
PDLIM5-202ENST00000318007 ANKRD61A6NGH8 418 aa13.3□□□□□ -0.28
PDLIM5-202ENST00000318007 CRYAAP02489 173 aa13.3□□□□□ -0.28
PDLIM5-202ENST00000318007 CPEP16870 476 aa13.3□□□□□ -0.28
PDLIM5-202ENST00000318007 BLMHQ13867 455 aa13.3□□□□□ -0.28
PDLIM5-202ENST00000318007 FAM27D1Q5T7N8 215 aa13.3□□□□□ -0.28
PDLIM5-202ENST00000318007 DMKNQ6E0U4 476 aaPredicted RBP13.3□□□□□ -0.28
PDLIM5-202ENST00000318007 TMEM108Q6UXF1 575 aa13.3□□□□□ -0.28
PDLIM5-202ENST00000318007 RGP1Q92546 391 aaPredicted RBP13.3□□□□□ -0.28
PDLIM5-202ENST00000318007 COMMD4Q9H0A8 199 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms