RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 ZIC2O95409 532 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 IGHV3-9P01782 118 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 C1QCP02747 245 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 GAAP10253 952 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 DDOSTP39656 456 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 SLC17A1Q14916 467 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 LIPNQ5VXI9 398 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 IGF2-ASQ6U949 168 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 PRR18Q8N4B5 295 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 SUMF1Q8NBK3 374 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 ROBO4Q8WZ75 1007 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 GPR179Q6PRD1 2367 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 FANCMQ8IYD8 2048 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 TRAV1-2A0A0B4J238 106 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 CENPVL1A0A0U1RR11 272 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 FAM171A2A8MVW0 826 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 EPPINO95925 133 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 PRH1P02810 166 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 SERPINE2P07093 398 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 UMODP07911 640 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 CCL3P10147 92 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 FPR2P25090 351 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 CD97P48960 835 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 SMIM21Q3B7S5 101 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 MEX3BQ6ZN04 569 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 OR6V1Q8N148 313 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 SLAMF9Q96A28 289 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 RAXQ9Y2V3 346 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 IFNL4K9M1U5 179 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 PLPP2O43688 288 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 KLF3P57682 345 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 CDNFQ49AH0 187 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 STEAP3Q658P3 488 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 COQ8AQ8NI60 647 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 RNF170Q96K19 258 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 TSPAN32Q96QS1 320 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 MS4A5Q9H3V2 200 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 CLDN16Q9Y5I7 305 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 A0A1W2PNR3 127 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 NAP1L6A6NFF2 107 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 C9orf172C9J069 976 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 DEGS1O15121 323 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 NKX2-8O15522 239 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 SULT1B1O43704 296 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 TK1P04183 234 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 GLRA1P23415 457 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 POU4F3Q15319 338 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 SPINK14Q6IE38 97 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 SPNS3Q6ZMD2 512 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 LHFPL2Q6ZUX7 228 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 THAP6Q8TBB0 222 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 MOGAT1Q96PD6 335 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 PIMREGQ9BSJ6 248 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 RBM38Q9H0Z9 239 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 CCDC88CQ9P219 2028 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 R4GMQ9 66 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 MDC1Q14676 2089 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 A0A1W2PQL4 384 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 CD8B2A6NJW9 211 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 H7C2Y5 167 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 CD8BP10966 210 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 VAMP1P23763 118 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 AGFG1P52594 562 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 LPCAT3Q6P1A2 487 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 OR8B3Q8NGG8 313 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 OR1J1Q8NGS3 322 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 OR10X1Q8NGY0 326 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 OR8B2Q96RD0 313 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 RP1P56715 2156 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 GTF2F2P13984 249 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 EIF2B2P49770 351 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 TEX30Q5JUR7 227 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 C6orf183Q5T699 404 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 C1QTNF12Q5T7M4 302 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 ASCL5Q7RTU5 278 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 SYT9Q86SS6 491 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 PIP4P1Q86T03 277 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 SAMD12Q8N8I0 201 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 FADS6Q8N9I5 356 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 ASB10Q8WXI3 467 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 CORO2AQ92828 525 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 OR52A1Q9UKL2 312 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 OR14I1A6ND48 311 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 EFSO43281 561 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 OIP5O43482 229 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 CX3CR1P49238 355 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 ARSKQ6UWY0 536 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 ELMOD2Q8IZ81 293 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 GCNT2Q8N0V5 402 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 OR56B1Q8NGI3 324 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 OR6M1Q8NGM8 313 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 ZFAND1Q8TCF1 268 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 EXTL2Q9UBQ6 330 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 CLEC2DQ9UHP7 191 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 KCNMB2Q9Y691 235 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 SLC2A10O95528 541 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 PTTG1O95997 202 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 GLAP06280 429 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 PSKH1P11801 424 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 ZNF133P52736 654 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms