RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 PLEKHN1Q494U1 663 aaPredicted RBP5.4□□□□□ -1.54
SEC22A-201ENST00000309934 NKAPLQ5M9Q1 402 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 NCMAPQ5T1S8 102 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 HIST2H3PS2Q5TEC6 136 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 LEMD1Q68G75 181 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 ASB18Q6ZVZ8 466 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 ZNF511Q8NB15 262 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 SYT14Q8NB59 555 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.4□□□□□ -1.54
SEC22A-201ENST00000309934 APOBEC4Q8WW27 367 aaKnown RBP5.4□□□□□ -1.54
SEC22A-201ENST00000309934 URM1Q9BTM9 101 aaKnown RBP5.4□□□□□ -1.54
SEC22A-201ENST00000309934 ULBP2Q9BZM5 246 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 RGCCQ9H4X1 137 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 GPR160Q9UJ42 338 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 NEUROG3Q9Y4Z2 214 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 IQCMA0A1B0GVH7 501 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 SHISA7A6NL88 538 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 MARCH11A6NNE9 402 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 LRRN3E7EW58 273 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 SLC16A7O60669 478 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 SERPINA5P05154 406 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 GPX4P36969 197 aaPredicted RBP5.4□□□□□ -1.55
SEC22A-201ENST00000309934 COMPP49747 757 aaPredicted RBP5.4□□□□□ -1.55
SEC22A-201ENST00000309934 SELENOVP59797 346 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 SLC10A1Q14973 349 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 OLFML2AQ68BL7 652 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 AAED1Q7RTV5 226 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 C1orf174Q8IYL3 243 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 JAGN1Q8N5M9 183 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 NUDT10Q8NFP7 164 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 OR10D4PQ8NGN7 298 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 OR4C3Q8NH37 302 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 SLC25A44Q96H78 314 aaPredicted RBP5.4□□□□□ -1.55
SEC22A-201ENST00000309934 SPSB2Q99619 263 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 CENPMQ9NSP4 180 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 TRAV1-2A0A0B4J238 106 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 FFAR1O14842 300 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 MRPL33O75394 65 aaKnown RBP5.4□□□□□ -1.55
SEC22A-201ENST00000309934 F10P00742 488 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 IGHA1P01876 353 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 RPLP1P05386 114 aaKnown RBP5.4□□□□□ -1.55
SEC22A-201ENST00000309934 CSN2P05814 226 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 ARR3P36575 388 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 RPL29P47914 159 aaKnown RBP5.4□□□□□ -1.55
SEC22A-201ENST00000309934 PER3P56645 1201 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 OR2B8PP59922 312 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 DUSP2Q05923 314 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 Q499Y3 187 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 IDNKQ5T6J7 187 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 ACSM5Q6NUN0 579 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 ARMC10Q8N2F6 343 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 KDM8Q8N371 416 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 PARP16Q8N5Y8 322 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 OR11G2Q8NGC1 345 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 OR2D3Q8NGH3 330 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 OR6X1Q8NH79 312 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 PAQR8Q8TEZ7 354 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 PGAM5Q96HS1 289 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 GPER1Q99527 375 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 TXN2Q99757 166 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 GAL3ST2Q9H3Q3 398 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 HINT3Q9NQE9 182 aaKnown RBP5.4□□□□□ -1.55
SEC22A-201ENST00000309934 SMCO4Q9NRQ5 59 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 GPR52Q9Y2T5 361 aa5.4□□□□□ -1.55
SEC22A-201ENST00000309934 TTC28Q96AY4 2481 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.39□□□□□ -1.55
SEC22A-201ENST00000309934 A0A1W2PNV4 684 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 PRAMEF27A3QJZ7 478 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 SLC35F4A4IF30 521 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 LINC00862A6NCI5 91 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 MKRN2OSH3BPM6 223 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 M0R082 166 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 RBBP9O75884 186 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 SELEP16581 610 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 DCTDP32321 178 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 PTGER1P34995 402 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 TAGLN2P37802 199 aaKnown RBP5.39□□□□□ -1.55
SEC22A-201ENST00000309934 SOX3P41225 446 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 IDH3GP51553 393 aaPredicted RBP5.39□□□□□ -1.55
SEC22A-201ENST00000309934 IRF3Q14653 427 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 PRSS53Q2L4Q9 553 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 PLA2G2CQ5R387 149 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 LANCL3Q6ZV70 420 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 LRRC28Q86X40 367 aaPredicted RBP5.39□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF441Q8N8Z8 693 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 OR5D14Q8NGL3 314 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 HGDQ93099 445 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 C10orf35Q96D05 121 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 ANAPC16Q96DE5 110 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 ZMYND19Q96E35 227 aaPredicted RBP5.39□□□□□ -1.55
SEC22A-201ENST00000309934 C4orf36Q96KX1 117 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 TBX5Q99593 518 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 RAB9BQ9NP90 201 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 B3GALT1Q9Y5Z6 326 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 A0A0U1RQK1 487 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF320A2RRD8 509 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 TVP23AA6NH52 213 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF878C9JN71 531 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF587BE7ETH6 402 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 BGLAPP02818 100 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms