RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 H7C2Y5 167 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 RAB3DO95716 219 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 UMODP07911 640 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 TGM4P49221 684 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 BMXP51813 675 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 CLDN12P56749 244 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 PPP1CBP62140 327 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 APCDD1LQ8NCL9 501 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 NPEPL1Q8NDH3 523 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 OR1M1Q8NGA1 313 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 OR6K3Q8NGY3 331 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 OTOSQ8NHW6 89 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 THAP6Q8TBB0 222 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 RAB40AQ8WXH6 277 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 RAB1CQ92928 201 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 SIGLEC12Q96PQ1 595 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 NUP50Q9UKX7 468 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 FRMPD3Q5JV73 1810 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 TICRRQ7Z2Z1 1910 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 OR14I1A6ND48 311 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 FADS1O60427 444 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 TSPAN9O75954 239 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 CCL2P13500 99 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 TNFAIP6P98066 277 aaPredicted RBP8.24□□□□□ -1.09
PTPRE-202ENST00000306042 TCF15Q12870 199 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 GNMTQ14749 295 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 UTS2BQ765I0 119 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 TMEM179BQ7Z7N9 219 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 OR6F1Q8NGZ6 308 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 DUS3LQ96G46 650 aaKnown RBP8.24□□□□□ -1.09
PTPRE-202ENST00000306042 OPN3Q9H1Y3 402 aaPredicted RBP8.24□□□□□ -1.09
PTPRE-202ENST00000306042 NINQ8N4C6 2090 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 TMEM129A0AVI4 362 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 ANKRD33BA6NCL7 494 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 CCNKO75909 580 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 IGKV3-11P04433 115 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 SCG5P05408 212 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 PTH2RP49190 550 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 MRPS10P82664 201 aaKnown RBP8.24□□□□□ -1.09
PTPRE-202ENST00000306042 CTU2Q2VPK5 515 aaKnown RBP8.24□□□□□ -1.09
PTPRE-202ENST00000306042 TBRG1Q3YBR2 411 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 FAM209AQ5JX71 171 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 SLC36A1Q7Z2H8 476 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 NARS2Q96I59 477 aaKnown RBP8.24□□□□□ -1.09
PTPRE-202ENST00000306042 GPR35Q9HC97 309 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 CLEC2DQ9UHP7 191 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 ICAM5Q9UMF0 924 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 SLC22A13Q9Y226 551 aa8.24□□□□□ -1.09
PTPRE-202ENST00000306042 ZFC3H1O60293 1989 aaKnown RBP8.24□□□□□ -1.09
PTPRE-202ENST00000306042 IGLV3-12A0A075B6K2 115 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 TRAV6A0A075B6T7 132 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 MEIS3P1A6NDR6 274 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 MAGEB4O15481 346 aaPredicted RBP8.23□□□□□ -1.09
PTPRE-202ENST00000306042 BPNT1O95861 308 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 RECKO95980 971 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 SHC1P29353 583 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 INO80CQ6PI98 192 aaPredicted RBP8.23□□□□□ -1.09
PTPRE-202ENST00000306042 SMAP2Q8WU79 429 aaPredicted RBP8.23□□□□□ -1.09
PTPRE-202ENST00000306042 ASB10Q8WXI3 467 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 C22orf15Q8WYQ4 148 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 IMMP1LQ96LU5 166 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 OR5M11Q96RB7 305 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 ZNF391Q9UJN7 358 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 MGAT4AQ9UM21 535 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 A1L4Q6 167 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 AKAP14Q86UN6 197 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 JMJD8Q96S16 334 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 NICN1Q9BSH3 213 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 TAS2R4Q9NYW5 299 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 CGGBP1Q9UFW8 167 aaPredicted RBP8.23□□□□□ -1.09
PTPRE-202ENST00000306042 NDUFB3O43676 98 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 IL1AP01583 271 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 PRH1P02810 166 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 CSF1P09603 554 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 CTLA4P16410 223 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 EIF5AP63241 154 aaKnown RBP8.23□□□□□ -1.09
PTPRE-202ENST00000306042 CATR1Q13166 79 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 MICBQ29980 383 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 SLC25A35Q3KQZ1 300 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 HIKESHIQ53FT3 197 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 LRRC10Q5BKY1 277 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 C9orf152Q5JTZ5 239 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 SLC25A26Q70HW3 274 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 RDH10Q8IZV5 341 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 ZNF808Q8N4W9 903 aaPredicted RBP8.23□□□□□ -1.09
PTPRE-202ENST00000306042 ZNF709Q8N972 641 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 COQ8AQ8NI60 647 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 CTHRC1Q96CG8 243 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 ASF1BQ9NVP2 202 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 SDK2Q58EX2 2172 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 MTCL1Q9Y4B5 1905 aaKnown RBP8.23□□□□□ -1.09
PTPRE-202ENST00000306042 IGKV3D-11A0A0A0MRZ8 115 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 SIRPB1O00241 398 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 RAF1P04049 648 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 SRMP19623 302 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 PCSK6P29122 969 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 ZNF133P52736 654 aaPredicted RBP8.23□□□□□ -1.09
PTPRE-202ENST00000306042 ZNF239Q16600 458 aaKnown RBP8.23□□□□□ -1.09
PTPRE-202ENST00000306042 PCK2Q16822 640 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 CLEC2AQ6UVW9 174 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms