RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 MDS2Q8NDY4 140 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 SCPEP1Q9HB40 452 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 NUDT15Q9NV35 164 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 PAQR5Q9NXK6 330 aaPredicted RBP17.11■□□□□ 0.33
HOXC4-201ENST00000303406 SLC5A6Q9Y289 635 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 N6AMT1Q9Y5N5 214 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 DCDC2BA2VCK2 349 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 CDRT15L2A8MXV6 281 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 DOK2O60496 412 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 RBBP9O75884 186 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 SCGNO76038 276 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 BPNT1O95861 308 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 MT-ND4P03905 459 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 ALDOBP05062 364 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 CSF1P09603 554 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 H2AFB2P0C5Z0 115 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 FTH1P19P0C7X4 201 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 FAUP35544 74 aaKnown RBP17.1■□□□□ 0.33
HOXC4-201ENST00000303406 GNALP38405 381 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 LHX2P50458 406 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 ECH1Q13011 328 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 ABHD12BQ7Z5M8 362 aaPredicted RBP17.1■□□□□ 0.33
HOXC4-201ENST00000303406 NUDT16L1Q9BRJ7 211 aaKnown RBP17.1■□□□□ 0.33
HOXC4-201ENST00000303406 TTTY12Q9BZ98 90 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 ATG5Q9H1Y0 275 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 GHITMQ9H3K2 345 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 GPR84Q9NQS5 396 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 TMEM38BQ9NVV0 291 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 RAB22AQ9UL26 194 aa17.1■□□□□ 0.33
HOXC4-201ENST00000303406 PAIP2BQ9ULR5 123 aaKnown RBP17.1■□□□□ 0.33
HOXC4-201ENST00000303406 NME2P1O60361 137 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 PRAF2O60831 178 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 SP1P08047 785 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 NME2P22392 152 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 PRSS3P35030 304 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 RAB35Q15286 201 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 NRN1LQ496H8 165 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 RAB12Q6IQ22 244 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 SLC25A25Q6KCM7 469 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 IGF2-ASQ6U949 168 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 BIVMQ86UB2 503 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 LIX1LQ8IVB5 337 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 OR14K1Q8NGZ2 314 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 ROBO4Q8WZ75 1007 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 GCDHQ92947 438 aaPredicted RBP17.09■□□□□ 0.33
HOXC4-201ENST00000303406 SPTSSAQ969W0 71 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 C10orf35Q96D05 121 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 ZNF486Q96H40 463 aaPredicted RBP17.09■□□□□ 0.33
HOXC4-201ENST00000303406 PGAM5Q96HS1 289 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 RNF122Q9H9V4 155 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 ING3Q9NXR8 418 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 KLK11Q9UBX7 282 aa17.09■□□□□ 0.33
HOXC4-201ENST00000303406 ZNF107Q9UII5 783 aaPredicted RBP17.09■□□□□ 0.33
HOXC4-201ENST00000303406 TRAV18A0A075B6X5 111 aa17.08■□□□□ 0.32
HOXC4-201ENST00000303406 OR5H15A6NDH6 313 aa17.08■□□□□ 0.32
HOXC4-201ENST00000303406 ALX3O95076 343 aa17.08■□□□□ 0.32
HOXC4-201ENST00000303406 F10P00742 488 aa17.08■□□□□ 0.32
HOXC4-201ENST00000303406 PSMB1P20618 241 aaKnown RBP17.08■□□□□ 0.32
HOXC4-201ENST00000303406 RRADP55042 308 aa17.08■□□□□ 0.32
HOXC4-201ENST00000303406 SCRN3Q0VDG4 424 aa17.08■□□□□ 0.32
HOXC4-201ENST00000303406 MTFR2Q6P444 385 aa17.08■□□□□ 0.32
HOXC4-201ENST00000303406 FAM57BQ71RH2 274 aa17.08■□□□□ 0.32
HOXC4-201ENST00000303406 GALNT16Q8N428 558 aa17.08■□□□□ 0.32
HOXC4-201ENST00000303406 MEIOBQ8N635 442 aa17.08■□□□□ 0.32
HOXC4-201ENST00000303406 DEFB124Q8NES8 71 aa17.08■□□□□ 0.32
HOXC4-201ENST00000303406 GPX8Q8TED1 209 aa17.08■□□□□ 0.32
HOXC4-201ENST00000303406 LINC00470Q9BZP3 86 aa17.08■□□□□ 0.32
HOXC4-201ENST00000303406 SLCO5A1Q9H2Y9 848 aa17.08■□□□□ 0.32
HOXC4-201ENST00000303406 CNTD2Q9H8S5 307 aa17.08■□□□□ 0.32
HOXC4-201ENST00000303406 ZNF319Q9P2F9 582 aa17.08■□□□□ 0.32
HOXC4-201ENST00000303406 TRAV6A0A075B6T7 132 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 A0A0A6YYJ9 748 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 METTL21EPA6NDL7 271 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 PRR33A8MZF0 331 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 KLRC4-KLRK1H3BQV0 150 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 ZNF708P17019 499 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 THBS4P35443 961 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 GSK3AP49840 483 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 CCR6P51684 374 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 CLDN18P56856 261 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 CD276Q5ZPR3 534 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 LINC00696Q6ZRV3 163 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 OR52N4Q8NGI2 321 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 OR4D6Q8NGJ1 314 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 RANGRFQ9HD47 186 aaPredicted RBP17.07■□□□□ 0.32
HOXC4-201ENST00000303406 POU2F3Q9UKI9 436 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 V9GYS6 101 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 SPEGQ15772 3267 aa17.07■□□□□ 0.32
HOXC4-201ENST00000303406 OR6C65A6NJZ3 312 aa17.06■□□□□ 0.32
HOXC4-201ENST00000303406 GMDSO60547 372 aa17.06■□□□□ 0.32
HOXC4-201ENST00000303406 KDM4BO94953 1096 aa17.06■□□□□ 0.32
HOXC4-201ENST00000303406 CRYGSP22914 178 aa17.06■□□□□ 0.32
HOXC4-201ENST00000303406 MECP2P51608 486 aaKnown RBP17.06■□□□□ 0.32
HOXC4-201ENST00000303406 ACTBP60709 375 aa17.06■□□□□ 0.32
HOXC4-201ENST00000303406 ACTG1P63261 375 aa17.06■□□□□ 0.32
HOXC4-201ENST00000303406 QRFPP83859 136 aa17.06■□□□□ 0.32
HOXC4-201ENST00000303406 GSG1Q2KHT4 349 aa17.06■□□□□ 0.32
HOXC4-201ENST00000303406 DRAM2Q6UX65 266 aa17.06■□□□□ 0.32
HOXC4-201ENST00000303406 OR2W3Q7Z3T1 314 aa17.06■□□□□ 0.32
HOXC4-201ENST00000303406 FGD2Q7Z6J4 655 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms