RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 BIN3Q9NQY0 253 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 GPR173Q9NS66 373 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 SLC22A11Q9NSA0 550 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 SCN5AQ14524 2016 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 SPTY2D1-AS1A0A0U1RR47 76 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 ANKRD20A5PA0PJZ0 165 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 TNFRSF10CO14798 259 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 OGG1O15527 345 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 PTP4A3O75365 173 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 QDPRP09417 244 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 ABCD3P28288 659 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 S100GP29377 79 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 CYCSP99999 105 aaKnown RBP11.96□□□□□ -0.49
CASC4-201ENST00000299957 FAM199XQ6PEV8 388 aaPredicted RBP11.96□□□□□ -0.49
CASC4-201ENST00000299957 GRINAQ7Z429 371 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 BPIFCQ8NFQ6 507 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 UBALD1Q8TB05 177 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 CMSS1Q9BQ75 279 aaKnown RBP11.96□□□□□ -0.49
CASC4-201ENST00000299957 SUCNR1Q9BXA5 334 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 GAREM1Q9H706 876 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 ZNF223Q9UK11 482 aaPredicted RBP11.96□□□□□ -0.49
CASC4-201ENST00000299957 PHF3Q92576 2039 aaKnown RBP11.96□□□□□ -0.49
CASC4-201ENST00000299957 OR4C45A6NMZ5 311 aa11.96□□□□□ -0.5
CASC4-201ENST00000299957 ARPC3O15145 178 aa11.96□□□□□ -0.5
CASC4-201ENST00000299957 PATE4P0C8F1 98 aa11.96□□□□□ -0.5
CASC4-201ENST00000299957 FAHP16930 419 aa11.96□□□□□ -0.5
CASC4-201ENST00000299957 NAT1P18440 290 aa11.96□□□□□ -0.5
CASC4-201ENST00000299957 ZNF84P51523 738 aa11.96□□□□□ -0.5
CASC4-201ENST00000299957 USF2Q15853 346 aaPredicted RBP11.96□□□□□ -0.5
CASC4-201ENST00000299957 CLPPQ16740 277 aaPredicted RBP11.96□□□□□ -0.5
CASC4-201ENST00000299957 OR5L2Q8NGL0 311 aa11.96□□□□□ -0.5
CASC4-201ENST00000299957 KCNJ16Q9NPI9 418 aa11.96□□□□□ -0.5
CASC4-201ENST00000299957 POLE3Q9NRF9 147 aa11.96□□□□□ -0.5
CASC4-201ENST00000299957 PCDHGA9Q9Y5G4 932 aaKnown RBP11.96□□□□□ -0.5
CASC4-201ENST00000299957 A0A1W2PP11 408 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 RPS10-NUDT3A0A1W2PQS6 291 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 C7orf66A4D0T2 115 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 TGM6O95932 706 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 ADRA2CP18825 462 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 PSMB6P28072 239 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 RPS10P46783 165 aaKnown RBP11.95□□□□□ -0.5
CASC4-201ENST00000299957 MRPS21P82921 87 aaKnown RBP11.95□□□□□ -0.5
CASC4-201ENST00000299957 FOXF1Q12946 379 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 ELAVL1Q15717 326 aaKnown RBP11.95□□□□□ -0.5
CASC4-201ENST00000299957 RNLSQ5VYX0 342 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 FBXW12Q6X9E4 464 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 GPR137CQ8N3F9 429 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 OR1M1Q8NGA1 313 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 KISS1RQ969F8 398 aaPredicted RBP11.95□□□□□ -0.5
CASC4-201ENST00000299957 OR2J2O76002 312 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 IL11P20809 199 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 ZNF626Q68DY1 528 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 C11orf40Q8WZ69 217 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 EVA1AQ9H8M9 152 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 PILRAQ9UKJ1 303 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 RAB22AQ9UL26 194 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 LAP3P28838 519 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 KIR2DL1P43626 348 aaPredicted RBP11.95□□□□□ -0.5
CASC4-201ENST00000299957 CAPZBP47756 277 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 IKZF1Q13422 519 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 C2orf68Q2NKX9 166 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 OR2W3Q7Z3T1 314 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 SLC7A11Q9UPY5 501 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 SCN8AQ9UQD0 1980 aa11.95□□□□□ -0.5
CASC4-201ENST00000299957 PNPP00491 289 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 DUSP1P28562 367 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 FZD2Q14332 565 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 INPP5JQ15735 1006 aaPredicted RBP11.94□□□□□ -0.5
CASC4-201ENST00000299957 TCEAL6Q6IPX3 200 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 ANKRD16Q6P6B7 361 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 OR10Z1Q8NGY1 313 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 NUBPLQ8TB37 319 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 LIN37Q96GY3 246 aaPredicted RBP11.94□□□□□ -0.5
CASC4-201ENST00000299957 MCOLN1Q9GZU1 580 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 CNTD2Q9H8S5 307 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 CHST11Q9NPF2 352 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 FSCN3Q9NQT6 498 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 PKDREJQ9NTG1 2253 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 A0A1W2PQF6 199 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 SNRPGP15A8MWD9 76 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 CD79AP11912 226 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 H2BFSP57053 126 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 PLGLB1Q02325 96 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 ACSM1Q08AH1 577 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 C17orf67Q0P5P2 114 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 RAB30Q15771 203 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 MOGAT2Q3SYC2 334 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 TMEM65Q6PI78 240 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 ACOT7LQ6ZUV0 252 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 CRIPAKQ8N1N5 446 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 MAGT1Q9H0U3 335 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 TXNIPQ9H3M7 391 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 C8orf33Q9H7E9 229 aaPredicted RBP11.94□□□□□ -0.5
CASC4-201ENST00000299957 WNT11O96014 354 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 GABRA1P14867 456 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 FOLR1P15328 257 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 NAGAP17050 411 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 GLRA1P23415 457 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 CPT2P23786 658 aa11.94□□□□□ -0.5
CASC4-201ENST00000299957 NKAIN1Q4KMZ8 207 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms