RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 MRPS28Q9Y2Q9 187 aaKnown RBP12.1□□□□□ -0.47
CDH8-201ENST00000299345 SPTBN5Q9NRC6 3674 aaKnown RBP12.1□□□□□ -0.47
CDH8-201ENST00000299345 EML5Q05BV3 1969 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 A0A1W2PNV4 684 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 ZSCAN5BA6NJL1 495 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 F5H5K5 113 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 BPNT1O95861 308 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 MECP2P51608 486 aaKnown RBP12.09□□□□□ -0.47
CDH8-201ENST00000299345 H2BFSP57053 126 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 PCK2Q16822 640 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 CLVS2Q5SYC1 327 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 C17orf107Q6ZR85 190 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 PNLDC1Q8NA58 520 aaKnown RBP12.09□□□□□ -0.47
CDH8-201ENST00000299345 ANGPTL6Q8NI99 470 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 WDR89Q96FK6 387 aaPredicted RBP12.09□□□□□ -0.47
CDH8-201ENST00000299345 B3GAT1Q9P2W7 334 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 EYSQ5T1H1 3165 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 OR2M5A3KFT3 312 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 CLDN6P56747 220 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 MFAP5Q13361 173 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 GLIPR1L1Q6UWM5 242 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 OR6X1Q8NH79 312 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 UQCC2Q9BRT2 126 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 RBM24Q9BX46 236 aaKnown RBP12.09□□□□□ -0.47
CDH8-201ENST00000299345 PFDN2Q9UHV9 154 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 HRH3Q9Y5N1 445 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 WDPCPO95876 746 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 PPP3CBP16298 524 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 GNB3P16520 340 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 FKBP2P26885 142 aaKnown RBP12.09□□□□□ -0.47
CDH8-201ENST00000299345 PI4KAP42356 2102 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 CX3CR1P49238 355 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 ATXN7L3Q14CW9 347 aaPredicted RBP12.09□□□□□ -0.47
CDH8-201ENST00000299345 KCTD9Q7L273 389 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 WDFY1Q8IWB7 410 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 ELP5Q8TE02 316 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 PTX4Q96A99 478 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 SLC6A7Q99884 636 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 ZNF160Q9HCG1 818 aa12.09□□□□□ -0.47
CDH8-201ENST00000299345 SRSF10O75494 262 aaKnown RBP12.08□□□□□ -0.48
CDH8-201ENST00000299345 PGA4P0DJD7 388 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 PGA3P0DJD8 388 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 AKR1C4P17516 323 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 DUSP3P51452 185 aaPredicted RBP12.08□□□□□ -0.48
CDH8-201ENST00000299345 C2orf68Q2NKX9 166 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 DCAF12L2Q5VW00 463 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 OR52W1Q6IF63 320 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 GSG1LQ6UXU4 331 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 TMPPEQ6ZT21 453 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 NPRL2Q8WTW4 380 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 TMPRSS13Q9BYE2 586 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 ALX4Q9H161 411 aaPredicted RBP12.08□□□□□ -0.48
CDH8-201ENST00000299345 HPF1Q9NWY4 346 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 FBXO4Q9UKT5 387 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 LHFPL6Q9Y693 200 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 A0A1B0GW55 424 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 ADAM10O14672 748 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 TRAF3IP2O43734 574 aaPredicted RBP12.08□□□□□ -0.48
CDH8-201ENST00000299345 CRTAPO75718 401 aaPredicted RBP12.08□□□□□ -0.48
CDH8-201ENST00000299345 DUX4L2P0CJ85 424 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 DUX4L3P0CJ86 424 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 DUX4L4P0CJ87 422 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 DUX4L5P0CJ88 424 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 DUX4L6P0CJ89 424 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 DUX4L7P0CJ90 424 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 FAM189A2Q15884 450 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 ZNF813Q6ZN06 617 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 ZNF546Q86UE3 836 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 GVQW1Q8N7I0 195 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 GNRHR2Q96P88 292 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 URM1Q9BTM9 101 aaKnown RBP12.08□□□□□ -0.48
CDH8-201ENST00000299345 MRPL13Q9BYD1 178 aaKnown RBP12.08□□□□□ -0.48
CDH8-201ENST00000299345 DUX4Q9UBX2 424 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 KLK13Q9UKR3 277 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 TMEM265A0A087WTH1 108 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 POM121CA8CG34 1229 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 STK17BO94768 372 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 SPDEFO95238 335 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 ITGB2P05107 769 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 VSIG8P0DPA2 414 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 AGTR1P30556 359 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 IL13RA1P78552 427 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 FGL1Q08830 312 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 HLXQ14774 488 aaPredicted RBP12.08□□□□□ -0.48
CDH8-201ENST00000299345 SLC22A6Q4U2R8 563 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 SFRP5Q5T4F7 317 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 ATPAF1Q5TC12 328 aaPredicted RBP12.08□□□□□ -0.48
CDH8-201ENST00000299345 PGAP1Q75T13 922 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 SEC22AQ96IW7 307 aa12.08□□□□□ -0.48
CDH8-201ENST00000299345 NAA11Q9BSU3 229 aaPredicted RBP12.08□□□□□ -0.48
CDH8-201ENST00000299345 HMSDA8MTL9 139 aa12.07□□□□□ -0.48
CDH8-201ENST00000299345 G3V3Q6 166 aa12.07□□□□□ -0.48
CDH8-201ENST00000299345 RAB27BO00194 218 aa12.07□□□□□ -0.48
CDH8-201ENST00000299345 GDF9O60383 454 aa12.07□□□□□ -0.48
CDH8-201ENST00000299345 CELA2AP08217 269 aa12.07□□□□□ -0.48
CDH8-201ENST00000299345 SSR4P51571 173 aa12.07□□□□□ -0.48
CDH8-201ENST00000299345 IL11RAQ14626 422 aa12.07□□□□□ -0.48
CDH8-201ENST00000299345 MPPED2Q15777 294 aa12.07□□□□□ -0.48
CDH8-201ENST00000299345 SLC25A53Q5H9E4 307 aa12.07□□□□□ -0.48
CDH8-201ENST00000299345 KCNG3Q8TAE7 436 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms