RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 ARPC4-TTLL3A0A0A6YYG9 625 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 A0A1W2PPW3 197 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 J3QLW9 94 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 KRT33AO76009 404 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 LALBAP00709 142 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 ZNF19P17023 458 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 AGTR1P30556 359 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 GABRA5P31644 462 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 ZNF672Q499Z4 452 aaPredicted RBP18.26■□□□□ 0.51
SMCO4-201ENST00000298966 RPL22L1Q6P5R6 122 aaKnown RBP18.26■□□□□ 0.51
SMCO4-201ENST00000298966 SSX6Q7RTT6 188 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 KLBQ86Z14 1044 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 ZNF679Q8IYX0 411 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 OR2AJ1Q8NGZ0 328 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 OR52N5Q8NH56 324 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 THEM6Q8WUY1 208 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 RPL3LQ92901 407 aaKnown RBP18.26■□□□□ 0.51
SMCO4-201ENST00000298966 OR8B4Q96RC9 309 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 HDHD5Q9BXW7 423 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 MROQ9BYG7 248 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 C1orf198Q9H425 327 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 TMEM160Q9NX00 188 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 CYB5R1Q9UHQ9 305 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 GDF2Q9UK05 429 aaPredicted RBP18.26■□□□□ 0.51
SMCO4-201ENST00000298966 POLR1DQ9Y2S0 133 aa18.26■□□□□ 0.51
SMCO4-201ENST00000298966 YLPM1P49750 1951 aaKnown RBP18.25■□□□□ 0.51
SMCO4-201ENST00000298966 ZNF587BE7ETH6 402 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 PLPP2O43688 288 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 SSX4O60224 188 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 NR4A1P22736 598 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 DCTDP32321 178 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 OR12D2P58182 307 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 EIF2B1Q14232 305 aaKnown RBP18.25■□□□□ 0.51
SMCO4-201ENST00000298966 SPCS2Q15005 226 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 TMEM249Q2WGJ8 235 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 FAM27BQ5VT28 67 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 SYT9Q86SS6 491 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 ZNF100Q8IYN0 542 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 TRAF4Q9BUZ4 470 aaPredicted RBP18.25■□□□□ 0.51
SMCO4-201ENST00000298966 OR51E2Q9H255 320 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 C12orf49Q9H741 205 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 NIPAL2Q9H841 368 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 SIAEQ9HAT2 523 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 GPR35Q9HC97 309 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 GNG8Q9UK08 70 aa18.25■□□□□ 0.51
SMCO4-201ENST00000298966 SF3B6Q9Y3B4 125 aaKnown RBP18.25■□□□□ 0.51
SMCO4-201ENST00000298966 OGG1O15527 345 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 UPK3AO75631 287 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 GPANK1O95872 356 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 IL32P24001 234 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 CRYBB2P43320 205 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 OR3A2P47893 321 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 HCCSP53701 268 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 TP53I3Q53FA7 332 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 PHYHD1Q5SRE7 291 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 CD200R1LQ6Q8B3 271 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 USP43Q70EL4 1123 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 ZNF627Q7L945 461 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 KRT77Q7Z794 578 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 RFLNBQ8N5W9 214 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 KBTBD8Q8NFY9 601 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 PELI1Q96FA3 418 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 ABHD6Q9BV23 337 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 CRLF2Q9HC73 371 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 FAIMQ9NVQ4 179 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 TMEM38BQ9NVV0 291 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 UPB1Q9UBR1 384 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 IKZF2Q9UKS7 526 aa18.24■□□□□ 0.51
SMCO4-201ENST00000298966 IGHV4-30-2A0A087WSY4 118 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 FARS2O95363 451 aaKnown RBP18.23■□□□□ 0.51
SMCO4-201ENST00000298966 HLA-DPB1P04440 258 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 CST2P09228 141 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 NTF4P34130 210 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 THBS2P35442 1172 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 RIDAP52758 137 aaKnown RBP18.23■□□□□ 0.51
SMCO4-201ENST00000298966 VBP1P61758 197 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 NCS1P62166 190 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 TUBA1BP68363 451 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 ROR2Q01974 943 aaKnown RBP18.23■□□□□ 0.51
SMCO4-201ENST00000298966 LSAMPQ13449 338 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 TSPO2Q5TGU0 170 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 FDX2Q6P4F2 183 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 TUBA1AQ71U36 451 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 DCXRQ7Z4W1 244 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 DPPA2Q7Z7J5 298 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 MS4A15Q8N5U1 240 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 YIPF7Q8N8F6 280 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 GJC3Q8NFK1 279 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 ST7LQ8TDW4 575 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 RNF133Q8WVZ7 376 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 HSD17B8Q92506 261 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 ZNF775Q96BV0 537 aaPredicted RBP18.23■□□□□ 0.51
SMCO4-201ENST00000298966 FOXB1Q99853 325 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 CHCHD6Q9BRQ6 235 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 DCUN1D5Q9BTE7 237 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 SHARPINQ9H0F6 387 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 MALT1Q9UDY8 824 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 SSR3Q9UNL2 185 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 KLHDC2Q9Y2U9 406 aa18.23■□□□□ 0.51
SMCO4-201ENST00000298966 FREM1Q5H8C1 2179 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms