RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 SKP2Q13309 424 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 COL19A1Q14993 1142 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 INPP5JQ15735 1006 aaPredicted RBP11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 SGCAQ16586 387 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 CHRFAM7AQ494W8 412 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 LY6G6FQ5SQ64 297 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 JMJD6Q6NYC1 403 aaPredicted RBP11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 LPCAT3Q6P1A2 487 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 DAZLQ92904 295 aaKnown RBP11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 CDC6Q99741 560 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 EHFQ9NZC4 300 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 ASAH2BP0C7U1 165 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 NFYBP25208 207 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 SFTPDP35247 375 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 PPICP45877 212 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 KCNJ3P48549 501 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 CLRN1P58418 232 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 S100A12P80511 92 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 CYCSP99999 105 aaKnown RBP11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 TOMM20Q15388 145 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 LINC00114Q6XXX2 140 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 OR51T1Q8NGJ9 327 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 NUBPLQ8TB37 319 aa11.28□□□□□ -0.6
TMEM200A-201ENST00000296978 TXNL1O43396 289 aa11.27□□□□□ -0.6
TMEM200A-201ENST00000296978 BIDP55957 195 aa11.27□□□□□ -0.6
TMEM200A-201ENST00000296978 RAB5BP61020 215 aa11.27□□□□□ -0.6
TMEM200A-201ENST00000296978 INSM1Q01101 510 aaPredicted RBP11.27□□□□□ -0.6
TMEM200A-201ENST00000296978 CSRP2Q16527 193 aa11.27□□□□□ -0.6
TMEM200A-201ENST00000296978 FLVCR1-AS1Q8TAF5 88 aa11.27□□□□□ -0.6
TMEM200A-201ENST00000296978 MCHR2Q969V1 340 aa11.27□□□□□ -0.6
TMEM200A-201ENST00000296978 SLC46A1Q96NT5 459 aa11.27□□□□□ -0.6
TMEM200A-201ENST00000296978 GDF2Q9UK05 429 aaPredicted RBP11.27□□□□□ -0.6
TMEM200A-201ENST00000296978 C14orf166Q9Y224 244 aaKnown RBP11.27□□□□□ -0.6
TMEM200A-201ENST00000296978 MRPS28Q9Y2Q9 187 aaKnown RBP11.27□□□□□ -0.6
TMEM200A-201ENST00000296978 A0A0A6YYH2 397 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 A0A1W2PQF6 199 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 A6NJ64 397 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 OR6C76A6NM76 312 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 TNFRSF10CO14798 259 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 TO15178 435 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 OR2T1O43869 369 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 NSA2O95478 260 aaKnown RBP11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 APOC1P02654 83 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 ABOP16442 354 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 RPS4XP62701 263 aaKnown RBP11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 AVPI1Q5T686 147 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 SLC22A24Q8N4F4 322 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 C14orf79Q96F83 325 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 SULT4A1Q9BR01 284 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 TXNIPQ9H3M7 391 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 CUTCQ9NTM9 273 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 MEMO1Q9Y316 297 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 R4GMQ9 66 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 OR6C65A6NJZ3 312 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 A8MVM7 634 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 PRAMEF26H0Y7S4 382 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 SERPINA2P20848 420 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 TNFRSF4P43489 277 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 DHPSP49366 369 aaPredicted RBP11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 PNLDC1Q8NA58 520 aaKnown RBP11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 OR13C8Q8NGS7 320 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 TMEM59Q9BXS4 323 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 TLNRD1Q9H1K6 362 aa11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 PURGQ9UJV8 347 aaKnown RBP11.27□□□□□ -0.61
TMEM200A-201ENST00000296978 A0A1W2PPC1 479 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 F5H5K5 113 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 SULT1C2O00338 296 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 SLC33A1O00400 549 aaPredicted RBP11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 IL33O95760 270 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 FCARP24071 287 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 POLR2HP52434 150 aaKnown RBP11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 ISXQ2M1V0 245 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 TMEM92Q6UXU6 159 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 TMPPEQ6ZT21 453 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 TMEM234Q8WY98 164 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 S1PR5Q9H228 398 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 MED9Q9NWA0 146 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 MRPL22Q9NWU5 206 aaKnown RBP11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 NOSIPQ9Y314 301 aaKnown RBP11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 ZDBF2Q9HCK1 2354 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 LOC101059948A0A1B0GTJ6 334 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 CPED1A4D0V7 1026 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 MST1P26927 711 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 YPEL5P62699 121 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 EIF5AP63241 154 aaKnown RBP11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 SGCBQ16585 318 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 LDLRAD3Q86YD5 345 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 TCTN2Q96GX1 697 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 NICN1Q9BSH3 213 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 URM1Q9BTM9 101 aaKnown RBP11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 RGCCQ9H4X1 137 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 NDRG3Q9UGV2 375 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 NCOR1O75376 2440 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 MED19A0JLT2 244 aaPredicted RBP11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 C1orf196B1AJZ1 125 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 LRP3O75074 770 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 IFNA21P01568 189 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 IL11P20809 199 aa11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 FBLP22087 321 aaKnown RBP11.26□□□□□ -0.61
TMEM200A-201ENST00000296978 ADH6P28332 368 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms