RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 PAQR4Q8N4S7 273 aaPredicted RBP13.15□□□□□ -0.3
CCDC140-201ENST00000295226 OR52N1Q8NH53 320 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 SPRYD4Q8WW59 207 aaPredicted RBP13.15□□□□□ -0.3
CCDC140-201ENST00000295226 GATAD2BQ8WXI9 593 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 UFD1Q92890 307 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 C4orf36Q96KX1 117 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 MNTQ99583 582 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 ATF6BQ99941 703 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 BRD7Q9NPI1 651 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 INPP5EQ9NRR6 644 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 LRP12Q9Y561 859 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 N6AMT1Q9Y5N5 214 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 LRRK2Q5S007 2527 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 IGHV1-18A0A0C4DH31 117 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 OR6C6A6NF89 314 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 TUBAL3A6NHL2 446 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 GPX5O75715 221 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 SERPINA5P05154 406 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 OCM2P0CE71 109 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 OCMP0CE72 109 aaPredicted RBP13.15□□□□□ -0.31
CCDC140-201ENST00000295226 SLC2A1P11166 492 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 STOMP27105 288 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 ETV6P41212 452 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 CRYBB2P43320 205 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 PLP2Q04941 152 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 CDONQ4KMG0 1287 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 KLHL36Q8N4N3 616 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 YIPF7Q8N8F6 280 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 ASB17Q8WXJ9 295 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 MROQ9BYG7 248 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 C6orf62Q9GZU0 229 aaPredicted RBP13.15□□□□□ -0.31
CCDC140-201ENST00000295226 EXOSC4Q9NPD3 245 aaKnown RBP13.15□□□□□ -0.31
CCDC140-201ENST00000295226 OBP2BQ9NPH6 170 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 ACOXLQ9NUZ1 547 aa13.15□□□□□ -0.31
CCDC140-201ENST00000295226 IQCMA0A1B0GVH7 501 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 A1L4Q6 167 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 C5orf49A4QMS7 147 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 ZNF878C9JN71 531 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 E9PI62 339 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 PHYHO14832 338 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 ABHD16AO95870 558 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 IGKV3-15P01624 115 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 KRT8P05787 483 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 CECR9P0C854 216 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 RORCP51449 518 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 BDH1Q02338 343 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 ROM1Q03395 351 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 HGFACQ04756 655 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 EGR3Q06889 387 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 KCTD18Q6PI47 426 aaPredicted RBP13.14□□□□□ -0.31
CCDC140-201ENST00000295226 DPPA2Q7Z7J5 298 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.14□□□□□ -0.31
CCDC140-201ENST00000295226 ZNF679Q8IYX0 411 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 CENPSQ8N2Z9 138 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 PPP1R14AQ96A00 147 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 WACQ9BTA9 647 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 HDHD2Q9H0R4 259 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 OR10A4Q9H209 315 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 DDX28Q9NUL7 540 aaKnown RBP13.14□□□□□ -0.31
CCDC140-201ENST00000295226 NDRG3Q9UGV2 375 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 GSTK1Q9Y2Q3 226 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 GRIP1Q9Y3R0 1128 aa13.14□□□□□ -0.31
CCDC140-201ENST00000295226 CLEC18AA5D8T8 446 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 C5orf63A6NC05 138 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 LALBAP00709 142 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 IL1AP01583 271 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 GALP22466 123 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 GABRA5P31644 462 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 TGFBR1P36897 503 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 SORDQ00796 357 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 GPR50Q13585 617 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 ZNF181Q2M3W8 571 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 TRIM16LQ309B1 348 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 LIPNQ5VXI9 398 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 CLEC18BQ6UXF7 455 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 TMPRSS11AQ6ZMR5 421 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 CLEC18CQ8NCF0 446 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 SLC30A7Q8NEW0 376 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 RNF166Q96A37 237 aaPredicted RBP13.13□□□□□ -0.31
CCDC140-201ENST00000295226 PELI1Q96FA3 418 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 POM121L2Q96KW2 1035 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 OR51B6Q9H340 312 aa13.13□□□□□ -0.31
CCDC140-201ENST00000295226 CAB39Q9Y376 341 aaPredicted RBP13.13□□□□□ -0.31
CCDC140-201ENST00000295226 ANKHD1Q8IWZ3 2542 aaKnown RBP13.13□□□□□ -0.31
CCDC140-201ENST00000295226 LOC110117498-PIK3R3F6TDL0 507 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 CLDN1O95832 211 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 PNPP00491 289 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 IGLV1-44P01699 117 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 PPP3CBP16298 524 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 CRYGSP22914 178 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 HSD11B1P28845 292 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 APLNRP35414 380 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 RIDAP52758 137 aaKnown RBP13.12□□□□□ -0.31
CCDC140-201ENST00000295226 MFGE8Q08431 387 aaPredicted RBP13.12□□□□□ -0.31
CCDC140-201ENST00000295226 SPOCK1Q08629 439 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 OXA1LQ15070 435 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 SPANXN2Q5MJ10 180 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 LIPKQ5VXJ0 399 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 KLBQ86Z14 1044 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 ZNF283Q8N7M2 679 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms