RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 CAPZBP47756 277 aa15.21■□□□□ 0.03
SPG7-201ENST00000268704 FLI1Q01543 452 aaPredicted RBP15.21■□□□□ 0.03
SPG7-201ENST00000268704 EBPQ15125 230 aaKnown RBP15.21■□□□□ 0.03
SPG7-201ENST00000268704 C1orf100Q5SVJ3 147 aa15.21■□□□□ 0.03
SPG7-201ENST00000268704 SLC26A10Q8NG04 563 aa15.21■□□□□ 0.03
SPG7-201ENST00000268704 PHYHIPLQ96FC7 376 aa15.21■□□□□ 0.03
SPG7-201ENST00000268704 HS3ST3A1Q9Y663 406 aa15.21■□□□□ 0.03
SPG7-201ENST00000268704 PIAS3Q9Y6X2 628 aa15.21■□□□□ 0.03
SPG7-201ENST00000268704 RTTNQ86VV8 2226 aa15.21■□□□□ 0.03
SPG7-201ENST00000268704 LOC390937A0A1W2PQ73 354 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 METTL21EPA6NDL7 271 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 TMEM150CB9EJG8 249 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 PRAMEF26H0Y7S4 382 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 NPIPB7O75200 414 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 VSIG8P0DPA2 414 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 ZNF823P16415 610 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 HFEQ30201 348 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 HAGHLQ6PII5 290 aaPredicted RBP15.2■□□□□ 0.02
SPG7-201ENST00000268704 GTPBP8Q8N3Z3 284 aaPredicted RBP15.2■□□□□ 0.02
SPG7-201ENST00000268704 OR4K17Q8NGC6 315 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 OR13C9Q8NGT0 318 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 ADAMTS18Q8TE60 1221 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 ARL5BQ96KC2 179 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 SLC2A8Q9NY64 477 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 SSX5O60225 188 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 MT-ATP6P00846 226 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 RD3LP0DJH9 198 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 PGCP20142 388 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 DLX2Q07687 328 aaPredicted RBP15.2■□□□□ 0.02
SPG7-201ENST00000268704 ZNF813Q6ZN06 617 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 TMEM200AQ86VY9 491 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 PIK3IP1Q96FE7 263 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 TLNRD1Q9H1K6 362 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 SLC22A11Q9NSA0 550 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 DZANK1Q9NVP4 752 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 BLACEA4D250 179 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 MSGN1A6NI15 193 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 ZNF217O75362 1048 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 ADAP1O75689 374 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 CRHP06850 196 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 COX15Q7KZN9 410 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 NUP54Q7Z3B4 507 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 EMC6Q9BV81 110 aa15.2■□□□□ 0.02
SPG7-201ENST00000268704 DUSP15Q9H1R2 295 aaPredicted RBP15.2■□□□□ 0.02
SPG7-201ENST00000268704 TRBV23-1A0A0A0MS06 115 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 MEGF11A6BM72 1044 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 F8W036 122 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 H0YIZ8 118 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 H7C2Y5 167 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 CD37P11049 281 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 ANOS1P23352 680 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 ABCD3P28288 659 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 POLR2HP52434 150 aaKnown RBP15.19■□□□□ 0.02
SPG7-201ENST00000268704 SLC26A5P58743 744 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 BLOC1S1P78537 153 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 CCDC36Q8IYA8 594 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 ARMC10Q8N2F6 343 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 DEFB119Q8N690 84 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 ZSCAN4Q8NAM6 433 aaPredicted RBP15.19■□□□□ 0.02
SPG7-201ENST00000268704 SOX7Q9BT81 388 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 A8MVM7 634 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 ALG1L2C9J202 215 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 PSMB6P28072 239 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 SCRN3Q0VDG4 424 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 SLC9A3R2Q15599 337 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 HLA-DQA1Q5Y7H0 255 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 SHISA6Q6ZSJ9 500 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 SLC16A13Q7RTY0 426 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.19■□□□□ 0.02
SPG7-201ENST00000268704 OR4A4PQ8NGN8 299 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 CPNE2Q96FN4 548 aaPredicted RBP15.19■□□□□ 0.02
SPG7-201ENST00000268704 CMSS1Q9BQ75 279 aaKnown RBP15.19■□□□□ 0.02
SPG7-201ENST00000268704 MESP1Q9BRJ9 268 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 RAB22AQ9UL26 194 aa15.19■□□□□ 0.02
SPG7-201ENST00000268704 A0A0A6YYH2 397 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 A6NJ64 397 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 TO15178 435 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 TSPAN2O60636 221 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 AHSA1O95433 338 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 IFNA6P05013 189 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 H2BFMP0C1H6 154 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 KCNJ3P48549 501 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 TMPRSS9Q7Z410 1059 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 NANPQ8TBE9 248 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 RNF126Q9BV68 326 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 MKL2Q9ULH7 1088 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 EDARQ9UNE0 448 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 FAM96BQ9Y3D0 163 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 SHISA8B8ZZ34 492 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 TTRP02766 147 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 HLA-GP17693 338 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 CRABP1P29762 137 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 NPBWR1P48145 328 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 NPY4RP50391 375 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 POU3F1Q03052 451 aaPredicted RBP15.18■□□□□ 0.02
SPG7-201ENST00000268704 PHF19Q5T6S3 580 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 AWAT2Q6E213 333 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 SVBPQ8N300 66 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 ZDHHC22Q8N966 263 aa15.18■□□□□ 0.02
SPG7-201ENST00000268704 RLN3Q8WXF3 142 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms