RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 RPS19BP1Q86WX3 136 aaKnown RBP11.28□□□□□ -0.6
PRPF6-201ENST00000266079 DND1Q8IYX4 353 aaKnown RBP11.28□□□□□ -0.6
PRPF6-201ENST00000266079 TBL1XR1Q9BZK7 514 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 EXO5Q9H790 373 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 TRAV27A0A087WT01 109 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 OR5H14A6NHG9 310 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 SSX5O60225 188 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 EIF1BO60739 113 aaKnown RBP11.28□□□□□ -0.6
PRPF6-201ENST00000266079 NUDT14O95848 222 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 HEXAP06865 529 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 CD63P08962 238 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 SLC25A4P12235 298 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 EIF1P41567 113 aaKnown RBP11.28□□□□□ -0.6
PRPF6-201ENST00000266079 DCAF7P61962 342 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 PDZK1IP1Q13113 114 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 DCAF10Q5QP82 559 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 C3orf33Q6P1S2 294 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 SKA3Q8IX90 412 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 SLC35F2Q8IXU6 374 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 OR51A7Q8NH64 312 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 BPIFA2Q96DR5 249 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 DCBLD2Q96PD2 775 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 CNN2Q99439 309 aaKnown RBP11.28□□□□□ -0.6
PRPF6-201ENST00000266079 C1orf198Q9H425 327 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 UBQLN4Q9NRR5 601 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 ICAM5Q9UMF0 924 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 ZNF281Q9Y2X9 895 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 ZNF337Q9Y3M9 751 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 ACACBO00763 2458 aa11.28□□□□□ -0.6
PRPF6-201ENST00000266079 HCRTR2O43614 444 aa11.27□□□□□ -0.6
PRPF6-201ENST00000266079 LYPD3O95274 346 aa11.27□□□□□ -0.6
PRPF6-201ENST00000266079 PMS2P2O95744 297 aa11.27□□□□□ -0.6
PRPF6-201ENST00000266079 IGHEP01854 428 aa11.27□□□□□ -0.6
PRPF6-201ENST00000266079 AKAIN1P0CW23 69 aa11.27□□□□□ -0.6
PRPF6-201ENST00000266079 NAA10P41227 235 aaPredicted RBP11.27□□□□□ -0.6
PRPF6-201ENST00000266079 NPBWR1P48145 328 aa11.27□□□□□ -0.6
PRPF6-201ENST00000266079 EEF1A1P68104 462 aaKnown RBP11.27□□□□□ -0.6
PRPF6-201ENST00000266079 CLN3Q13286 438 aa11.27□□□□□ -0.6
PRPF6-201ENST00000266079 RAB12Q6IQ22 244 aa11.27□□□□□ -0.6
PRPF6-201ENST00000266079 SDR9C7Q8NEX9 313 aa11.27□□□□□ -0.6
PRPF6-201ENST00000266079 TLNRD1Q9H1K6 362 aa11.27□□□□□ -0.6
PRPF6-201ENST00000266079 FKRPQ9H9S5 495 aa11.27□□□□□ -0.6
PRPF6-201ENST00000266079 ALPK2Q86TB3 2170 aa11.27□□□□□ -0.6
PRPF6-201ENST00000266079 SERINC4A6NH21 518 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 XRCC3O43542 346 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 TSPAN2O60636 221 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 IFNGP01579 166 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 IFI6P09912 130 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 PSMD4P55036 377 aaKnown RBP11.27□□□□□ -0.61
PRPF6-201ENST00000266079 SNRPEP62304 92 aaKnown RBP11.27□□□□□ -0.61
PRPF6-201ENST00000266079 RTP5Q14D33 572 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 BEX5Q5H9J7 111 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 ZNF813Q6ZN06 617 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 POMGNT2Q8NAT1 580 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 STEAP2Q8NFT2 490 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 NUBPLQ8TB37 319 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 CCDC107Q8WV48 283 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 BCL2L14Q9BZR8 327 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 MMP25Q9NPA2 562 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 KLRF1Q9NZS2 232 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 EML6Q6ZMW3 1958 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 TMEM82A0PJX8 343 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 FGF16O43320 207 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 TLX3O43711 291 aaPredicted RBP11.27□□□□□ -0.61
PRPF6-201ENST00000266079 GTF2F2P13984 249 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 OR1Q1Q15612 314 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.27□□□□□ -0.61
PRPF6-201ENST00000266079 C11orf87Q6NUJ2 197 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 STAC2Q6ZMT1 411 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 ACOT7LQ6ZUV0 252 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 ADAMTS17Q8TE56 1095 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 PLA2G3Q9NZ20 509 aa11.27□□□□□ -0.61
PRPF6-201ENST00000266079 ATRXP46100 2492 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 RNF222A6NCQ9 220 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 CDC40O60508 579 aaKnown RBP eCLIP11.26□□□□□ -0.61
PRPF6-201ENST00000266079 ACTL6AO96019 429 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 F12P00748 615 aaPredicted RBP11.26□□□□□ -0.61
PRPF6-201ENST00000266079 OR4E1P0C645 316 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 RAB5BP61020 215 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 LTBQ06643 244 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 EIPR1Q53HC9 387 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 RBMS3Q6XE24 437 aaKnown RBP11.26□□□□□ -0.61
PRPF6-201ENST00000266079 MDGA2Q7Z553 956 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 OR1J4Q8NGS1 313 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 M1APQ8TC57 530 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 RPS4Y2Q8TD47 263 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 RGP1Q92546 391 aaPredicted RBP11.26□□□□□ -0.61
PRPF6-201ENST00000266079 INTS12Q96CB8 462 aaKnown RBP11.26□□□□□ -0.61
PRPF6-201ENST00000266079 SLITRK2Q9H156 845 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 POFUT1Q9H488 388 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 TCF7L1Q9HCS4 588 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 NIT2Q9NQR4 276 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 A0A1B0GTI1 187 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 NPIPB9F8W1W9 429 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 ITGB2P05107 769 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 CD82P27701 267 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 SRSF4Q08170 494 aaKnown RBP11.26□□□□□ -0.61
PRPF6-201ENST00000266079 PLA2G7Q13093 441 aa11.26□□□□□ -0.61
PRPF6-201ENST00000266079 GGTLC2Q14390 218 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms