RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 THBS1P07996 1170 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 MAOAP21397 527 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 SLC6A9P48067 706 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 SPEM2Q0P670 501 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 FHL1Q13642 323 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 UBE2V2Q15819 145 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 C2orf76Q3KRA6 126 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 ZNF627Q7L945 461 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 CBARPQ8N350 705 aaPredicted RBP7.87□□□□□ -1.15
VAPB-201ENST00000265619 DEFB119Q8N690 84 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 ZNF615Q8N8J6 731 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 OR7G2Q8NG99 324 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 CXorf40AQ8TE69 158 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 OR7D2Q96RA2 312 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 INTS14Q96SY0 518 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 GLRX2Q9NS18 164 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 FRRS1LQ9P0K9 344 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 ICAM5Q9UMF0 924 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 OBSL1O75147 1896 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 TRBV6-7A0A0A0MS04 114 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 ZNF705GA8MUZ8 300 aaPredicted RBP7.87□□□□□ -1.15
VAPB-201ENST00000265619 CNOT4O95628 575 aaKnown RBP7.87□□□□□ -1.15
VAPB-201ENST00000265619 MBPP02686 304 aaPredicted RBP7.87□□□□□ -1.15
VAPB-201ENST00000265619 LSSP48449 732 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 SULT1A2P50226 295 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 RAB30Q15771 203 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 HAGHQ16775 308 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 GGNBP1Q5YKI7 109 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 ASPHD2Q6ICH7 369 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 NXPE4Q6UWF7 544 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 C1orf122Q6ZSJ8 110 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 SLC25A42Q86VD7 318 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 OR14K1Q8NGZ2 314 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 LCN9Q8WX39 176 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 PPP1R14AQ96A00 147 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 TMEM159Q96B96 161 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 OR10C1Q96KK4 312 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 AICDAQ9GZX7 198 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 SERGEFQ9UGK8 458 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 WIF1Q9Y5W5 379 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 METTL12A8MUP2 240 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 J3KRW8 73 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 CYB5BO43169 146 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 APODP05090 189 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 PGA3P0DJD8 388 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 PI3P19957 117 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 THEM4Q5T1C6 240 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 ETFRF1Q6IPR1 90 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 BTNL3Q6UXE8 466 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 UBE3DQ7Z6J8 389 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 RNASE8Q8TDE3 154 aaKnown RBP7.86□□□□□ -1.15
VAPB-201ENST00000265619 SNX22Q96L94 193 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 SLC17A9Q9BYT1 436 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 TM7SF3Q9NS93 570 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 TNRC18O15417 2968 aaPredicted RBP7.86□□□□□ -1.15
VAPB-201ENST00000265619 RIIAD1A6NNX1 92 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 C4orf51C9J302 202 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 C5orf67F2Z3F1 127 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 LYPD3O95274 346 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 NGFRP08138 427 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 MELTFP08582 738 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 SLC2A1P11166 492 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 PSMB5P28074 263 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 GABRA4P48169 554 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 RGS19P49795 217 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 EGR3Q06889 387 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 LPCAT3Q6P1A2 487 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 ZNF550Q7Z398 422 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 NUP54Q7Z3B4 507 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 C17orf64Q86WR6 236 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 SHISA5Q8N114 240 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 ACOT4Q8N9L9 421 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 OR13C9Q8NGT0 318 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 OR6K6Q8NGW6 343 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 CMBLQ96DG6 245 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 TSSK2Q96PF2 358 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 SYT4Q9H2B2 425 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 TAS2R8Q9NYW2 309 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 C2orf16Q68DN1 1984 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 TTC28Q96AY4 2481 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 RRP8O43159 456 aaKnown RBP7.86□□□□□ -1.15
VAPB-201ENST00000265619 EFSO43281 561 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 IL2RAP01589 272 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 PRNPP04156 253 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 PGA4P0DJD7 388 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 PGA5P0DJD9 388 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 HLA-GP17693 338 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 NPY4RP50391 375 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 CEBPGP53567 150 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 RAB32Q13637 225 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 CDCP2Q5VXM1 449 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 NCR3LG1Q68D85 454 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 TEX38Q6PEX7 206 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 PLPP7Q8NBV4 271 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 OR1J1Q8NGS3 322 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 DTD2Q96FN9 168 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 FBXO34Q9NWN3 711 aa7.86□□□□□ -1.15
VAPB-201ENST00000265619 MASP2O00187 686 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 DOK2O60496 412 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 C1orf105O95561 183 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms