RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 GABARAPL3Q9BY60 117 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 A0A1W2PPC4 97 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 HRH1P35367 487 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 FABP6P51161 128 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 CCR5P51681 352 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 ZNF85Q03923 595 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 CDC20BQ86Y33 519 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 KCNE4Q8WWG9 221 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 ZAR1LA6NP61 321 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 CEACAM5P06731 702 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 SRFP11831 508 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 TMEM196Q5HYL7 178 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 FAM74A1Q5RGS3 127 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 TMEM268Q5VZI3 342 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 CXorf67Q86X51 503 aaPredicted RBP10.96□□□□□ -0.65
COL8A1-201ENST00000261037 ZDHHC23Q8IYP9 409 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 OR4F5Q8NH21 305 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 AKR7LQ8NHP1 331 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 PHYHIPQ92561 330 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 TECTBQ96PL2 329 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 FYTTD1Q96QD9 318 aaKnown RBP10.96□□□□□ -0.65
COL8A1-201ENST00000261037 OR4F4Q96R69 305 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 KCNIP2Q9NS61 270 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 R4GMQ9 66 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 ARPC3O15145 178 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 PIAS2O75928 621 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 ZNF121P58317 390 aaPredicted RBP10.96□□□□□ -0.65
COL8A1-201ENST00000261037 ACVR1Q04771 509 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 ZNF816Q0VGE8 651 aaPredicted RBP10.96□□□□□ -0.65
COL8A1-201ENST00000261037 TAF9Q16594 264 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 RTL8BQ17RB0 113 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 EMC4Q5J8M3 183 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 CYHR1Q6ZMK1 362 aa10.96□□□□□ -0.65
COL8A1-201ENST00000261037 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.96□□□□□ -0.65
COL8A1-201ENST00000261037 SLC22A20A6NK97 555 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 H2AFB1P0C5Y9 115 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 DIO1P49895 249 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 DEFA6Q01524 100 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 FAM58AQ8N1B3 248 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 APH1BQ8WW43 257 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 SEH1LQ96EE3 360 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 FZR1Q9UM11 496 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 ABCA3Q99758 1704 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 MRPL58Q14197 206 aaKnown RBP10.96□□□□□ -0.66
COL8A1-201ENST00000261037 Q6ZNB5 142 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 MFSD4AQ8N468 514 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 ATF6BQ99941 703 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 FAM117AQ9C073 453 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 MAGT1Q9H0U3 335 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 NARFLQ9H6Q4 476 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 PLA2G3Q9NZ20 509 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 POLDIP2Q9Y2S7 368 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 A0A1B0GTL3 188 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 FRG2CA6NGY1 282 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 GPM6AP51674 278 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 EXD3Q8N9H8 876 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 LRRC61Q9BV99 259 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 CLCF1Q9UBD9 225 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 KCNE3Q9Y6H6 103 aa10.96□□□□□ -0.66
COL8A1-201ENST00000261037 A0A1W2PR80 420 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 DCTN6O00399 190 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 GLB1P16278 677 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 FCGR2CP31995 323 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 DDOSTP39656 456 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 PHYHD1Q5SRE7 291 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 CREB3L2Q70SY1 520 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 HES7Q9BYE0 225 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 TGIF2Q9GZN2 237 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 GDF2Q9UK05 429 aaPredicted RBP10.95□□□□□ -0.66
COL8A1-201ENST00000261037 SSC5DA1L4H1 1573 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 ST8SIA3O43173 380 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 PDGFAP04085 211 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 STAC2Q6ZMT1 411 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 KLHDC8BQ8IXV7 354 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 OR52B4Q8NGK2 314 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 LYSMD1Q96S90 227 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 MOB1AQ9H8S9 216 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 BARX1Q9HBU1 254 aaPredicted RBP10.95□□□□□ -0.66
COL8A1-201ENST00000261037 IGLV3-25P01717 112 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 FAM26EQ8N5C1 309 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 RHNO1Q9BSD3 238 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 ESRP2Q9H6T0 727 aaKnown RBP10.95□□□□□ -0.66
COL8A1-201ENST00000261037 PMS2P1A4D2B8 440 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 CRYAAP02489 173 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 SLC25A6P12236 298 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 CSN1S1P47710 185 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 EGR3Q06889 387 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 PCK2Q16822 640 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 TMEM9BQ9NQ34 198 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 ZNF331Q9NQX6 463 aaPredicted RBP10.95□□□□□ -0.66
COL8A1-201ENST00000261037 BCORQ6W2J9 1755 aa10.95□□□□□ -0.66
COL8A1-201ENST00000261037 VAMP5O95183 116 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 EXOSC2Q13868 293 aaKnown RBP10.94□□□□□ -0.66
COL8A1-201ENST00000261037 SHBQ15464 509 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 RPL7L1Q6DKI1 246 aaKnown RBP10.94□□□□□ -0.66
COL8A1-201ENST00000261037 ZNF573Q86YE8 665 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 ANKRD53Q8N9V6 530 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 MARCH1Q8TCQ1 289 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 PLPPR2Q96GM1 343 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 SIGLEC11Q96RL6 698 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms