RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 KCNJ3P48549 501 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 TMEM183BQ1AE95 376 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 USP51Q70EK9 711 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 GABRG1Q8N1C3 465 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 SLC39A11Q8N1S5 342 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 OR2AK2Q8NG84 335 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 GOT1L1Q8NHS2 421 aaPredicted RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 DYNC2LI1Q8TCX1 351 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 C2CD4CQ8TF44 421 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 ST8SIA1Q92185 356 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 PINX1Q96BK5 328 aaKnown RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 SMIM7Q9BQ49 75 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 NRXN2Q9P2S2 1712 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 ZNF816-ZNF321PA0A0X1KG74 233 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 IFITM5A6NNB3 132 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 RRASP10301 218 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 HIST1H1CP16403 213 aaKnown RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 BMI1P35226 326 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 UBE2IP63279 158 aaKnown RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 SMIM21Q3B7S5 101 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 FAM78AQ5JUQ0 283 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 TSEN54Q7Z6J9 526 aaKnown RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 ABI3BPQ7Z7G0 1075 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 OR5AP2Q8NGF4 316 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 HLA-CQ95604 372 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 RNF186Q9NXI6 227 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 LRIT1Q9P2V4 623 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 POLDIP2Q9Y2S7 368 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 HS3ST3A1Q9Y663 406 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 MED12LQ86YW9 2145 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 RAB27BO00194 218 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 NRASP01111 189 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 SLC10A3P09131 477 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 ERHP84090 104 aaKnown RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 DMWDQ09019 674 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 IL10RAQ13651 578 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 LTC4SQ16873 150 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 PXDC1Q5TGL8 231 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 C17orf107Q6ZR85 190 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 BCORP1Q8N888 145 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 ZNF740Q8NDX6 193 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 LKAAEAR1Q8TD35 194 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 ZNF2Q9BSG1 426 aaPredicted RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 LAT2Q9GZY6 243 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 ZNF629Q9UEG4 869 aaPredicted RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 PCDH15Q96QU1 1955 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 AQP7O14520 342 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 SLC31A2O15432 143 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 PDZD11Q5EBL8 140 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 ABHD17CQ6PCB6 329 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 DTWD2Q8NBA8 298 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 NECAP1Q8NC96 275 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 AGBL5Q8NDL9 886 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 FGF13Q92913 245 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 INSM2Q96T92 566 aaPredicted RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 SRRQ9GZT4 340 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 CCDC187A0A096LP49 1063 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 RFPL4AA6NLU0 287 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 ZNF727A8MUV8 499 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 RFPL4AL1F8VTS6 287 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 TRIM77I1YAP6 450 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 PLPP1O14494 284 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 PDGFBP01127 241 aaPredicted RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 OR4E1P0C645 316 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 SLC25A6P12236 298 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 MMP11P24347 488 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 PIGPP57054 158 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 CTBSQ01459 385 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 SLCO4A1Q96BD0 722 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 APH1AQ96BI3 265 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 SUCNR1Q9BXA5 334 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 CXXC1Q9P0U4 656 aaPredicted RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 SLC17A4Q9Y2C5 497 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 KLRC4-KLRK1H3BQV0 150 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 GFRA2O00451 464 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 CTNSO60931 367 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 SMIM17P0DL12 118 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 EXOSC2Q13868 293 aaKnown RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 ERV3-1Q14264 604 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 FOXB2Q5VYV0 432 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 OR2T2Q6IF00 324 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 TIPARPQ7Z3E1 657 aaKnown RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 ARHGEF39Q8N4T4 335 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 TMEM178AQ8NBL3 297 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 ZNF845Q96IR2 970 aaPredicted RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 C2orf50Q96LR7 162 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 C19orf43Q9BQ61 176 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 NMES1Q9C002 83 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 ZMAT3Q9HA38 289 aaKnown RBP4.38□□□□□ -1.71
RC3H1-201ENST00000258349 PPP1R3CQ9UQK1 317 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 SLC5A6Q9Y289 635 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 ARL2-SNX15V9GYD0 113 aa4.38□□□□□ -1.71
RC3H1-201ENST00000258349 VAMP5O95183 116 aa4.37□□□□□ -1.71
RC3H1-201ENST00000258349 PVRP15151 417 aa4.37□□□□□ -1.71
RC3H1-201ENST00000258349 COX5AP20674 150 aa4.37□□□□□ -1.71
RC3H1-201ENST00000258349 CST5P28325 142 aaPredicted RBP4.37□□□□□ -1.71
RC3H1-201ENST00000258349 KIR2DS2P43631 304 aa4.37□□□□□ -1.71
RC3H1-201ENST00000258349 RBP2P50120 134 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms