RNA–Protein interactions for RNA: ENST00000251722.10

USP40-201, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP40, Length 5,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-201ENST00000251722 WBP2Q969T9 261 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 DEFB127Q9H1M4 99 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 C12orf49Q9H741 205 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 PIGLQ9Y2B2 252 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 ABCD4O14678 606 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 SORBS2O94875 1100 aaKnown RBP11.6□□□□□ -0.55
USP40-201ENST00000251722 PAPLNO95428 1278 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 FABP4P15090 132 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 TBXA2RP21731 343 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 TRIP6Q15654 476 aaKnown RBP11.6□□□□□ -0.55
USP40-201ENST00000251722 LEMD1Q68G75 181 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 DCXRQ7Z4W1 244 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 PNPLA1Q8N8W4 532 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 OPN3Q9H1Y3 402 aaPredicted RBP11.6□□□□□ -0.55
USP40-201ENST00000251722 CHST8Q9H2A9 424 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 PLEKHF2Q9H8W4 249 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 SLC25A19Q9HC21 320 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 TRAPPC4Q9Y296 219 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 OR2A25A4D2G3 310 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 FAM183AA6NL82 134 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 AQP8O94778 261 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 AKR7A3O95154 331 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 GSTP1P09211 210 aaKnown RBP11.6□□□□□ -0.55
USP40-201ENST00000251722 MGMTP16455 207 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 CDK5Q00535 292 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 TPBGQ13641 420 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 TRMT12Q53H54 448 aaKnown RBP11.6□□□□□ -0.55
USP40-201ENST00000251722 ESPNLQ6ZVH7 1005 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 PRICKLE2Q7Z3G6 844 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 REC114Q7Z4M0 266 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 YRDCQ86U90 279 aaKnown RBP11.6□□□□□ -0.55
USP40-201ENST00000251722 PRSS35Q8N3Z0 413 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 OR8D4Q8NGM9 314 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 DYRK2Q92630 601 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 HAO2Q9NYQ3 351 aa11.6□□□□□ -0.55
USP40-201ENST00000251722 RGPD4Q7Z3J3 1758 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 MT-ND4P03905 459 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 ZNF728P0DKX0 622 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 ITGB8P26012 769 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 BLVRBP30043 206 aaPredicted RBP11.59□□□□□ -0.55
USP40-201ENST00000251722 CLDN6P56747 220 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 C16orf52Q8NHV5 167 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 H1FXQ92522 213 aaKnown RBP11.59□□□□□ -0.55
USP40-201ENST00000251722 TMEM106AQ96A25 262 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 CMC2Q9NRP2 79 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 OTOL1A6NHN0 477 aaPredicted RBP11.59□□□□□ -0.55
USP40-201ENST00000251722 ANGPTL7O43827 346 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 SOD1P00441 154 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 ATP1B1P05026 303 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 COL5A1-AS1Q5SY13 56 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 GGNBP1Q5YKI7 109 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 TMPRSS7Q7RTY8 843 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 HMGCLL1Q8TB92 370 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 SELENOIQ9C0D9 397 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 IL17BQ9UHF5 180 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 OSGIN1Q9UJX0 560 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 COX20Q5RI15 118 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 KISS1RQ969F8 398 aaPredicted RBP11.59□□□□□ -0.55
USP40-201ENST00000251722 A0A1B0GV90 55 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 MSTNO14793 375 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 SLC14A1Q13336 389 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 PLXDC2Q6UX71 529 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 DDOQ99489 341 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 DOK1Q99704 481 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 SLC23A2Q9UGH3 650 aa11.59□□□□□ -0.55
USP40-201ENST00000251722 A0A0A6YYD5 115 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 SERPINA7P05543 415 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 TNFRSF1AP19438 455 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 GALNSP34059 522 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 PTGER1P34995 402 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 PCBP4P57723 403 aaKnown RBP11.58□□□□□ -0.56
USP40-201ENST00000251722 HIST1H3AP68431 136 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 GHSRQ92847 366 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 SLC25A21Q9BQT8 299 aaPredicted RBP11.58□□□□□ -0.56
USP40-201ENST00000251722 TRGV5A0A0B4J1U4 118 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 AQP7O14520 342 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 KLK10O43240 276 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 GABRA1P14867 456 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 ZNF362Q5T0B9 420 aaPredicted RBP11.58□□□□□ -0.56
USP40-201ENST00000251722 ZNF679Q8IYX0 411 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 DUSP15Q9H1R2 295 aaPredicted RBP11.58□□□□□ -0.56
USP40-201ENST00000251722 KIAA1456Q9P272 454 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 P2RY10O00398 339 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 SULT1A2P50226 295 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 CLDN15P56746 228 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 RPS18P62269 152 aaKnown RBP11.58□□□□□ -0.56
USP40-201ENST00000251722 SPEM2Q0P670 501 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 VWA2Q5GFL6 755 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 ZNF766Q5HY98 468 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 KDM4DQ6B0I6 523 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 WDR74Q6RFH5 385 aaPredicted RBP11.58□□□□□ -0.56
USP40-201ENST00000251722 APH1BQ8WW43 257 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 HRASLSQ9HDD0 168 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 MYH15Q9Y2K3 1946 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 LOC390937A0A1W2PQ73 354 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 ICOSLGO75144 302 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 PNLIPP16233 465 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 OR1C1Q15619 314 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 SYT14P1Q58G82 188 aa11.58□□□□□ -0.56
USP40-201ENST00000251722 TMEM207Q6UWW9 146 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms