RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 UBQLN4Q9NRR5 601 aa18.34■□□□□ 0.53
SNX3-201ENST00000230085 MRPS33Q9Y291 106 aaKnown RBP18.34■□□□□ 0.53
SNX3-201ENST00000230085 LAMA5O15230 3695 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 PLATP00750 562 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 ISG15P05161 165 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 DLSTP36957 453 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 CBX5P45973 191 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 GSK3AP49840 483 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 SCRN3Q0VDG4 424 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 DRAM2Q6UX65 266 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 TTLL10Q6ZVT0 673 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 CATSPERDQ86XM0 798 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 BPIFB2Q8N4F0 458 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 NKAIN3Q8N8D7 197 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 ZNF615Q8N8J6 731 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 DMBX1Q8NFW5 382 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 ASB5Q8WWX0 329 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 FOXRED1Q96CU9 486 aaPredicted RBP18.33■□□□□ 0.53
SNX3-201ENST00000230085 SPRY4Q9C004 299 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 TINAGL1Q9GZM7 467 aaPredicted RBP18.33■□□□□ 0.53
SNX3-201ENST00000230085 ELOVL3Q9HB03 270 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 SRA1Q9HD15 236 aaKnown RBP18.33■□□□□ 0.53
SNX3-201ENST00000230085 CUTCQ9NTM9 273 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 PRODH2Q9UF12 536 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 ATPIF1Q9UII2 106 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 PCDHB10Q9UN67 800 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 CEP295Q9C0D2 2601 aa18.33■□□□□ 0.53
SNX3-201ENST00000230085 CPAMD8Q8IZJ3 1885 aa18.33■□□□□ 0.52
SNX3-201ENST00000230085 FER1L5A0AVI2 2057 aa18.33■□□□□ 0.52
SNX3-201ENST00000230085 TEX13DA0A0J9YY54 714 aaPredicted RBP18.32■□□□□ 0.52
SNX3-201ENST00000230085 DBX1A6NMT0 343 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 TGFBR3LH3BV60 316 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 SCGNO76038 276 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 SLC18B1Q6NT16 456 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 KCTD18Q6PI47 426 aaPredicted RBP18.32■□□□□ 0.52
SNX3-201ENST00000230085 SHISA5Q8N114 240 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 ZSCAN1Q8NBB4 408 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 PPP1R1CQ8WVI7 109 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 DVL3Q92997 716 aaPredicted RBP18.32■□□□□ 0.52
SNX3-201ENST00000230085 VSX1Q9NZR4 365 aaPredicted RBP18.32■□□□□ 0.52
SNX3-201ENST00000230085 ZNF230Q9UIE0 474 aaPredicted RBP18.32■□□□□ 0.52
SNX3-201ENST00000230085 DHDHQ9UQ10 334 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 RHBDD3Q9Y3P4 386 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 TVP23AA6NH52 213 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 SRSF10O75494 262 aaKnown RBP18.32■□□□□ 0.52
SNX3-201ENST00000230085 IGHMP01871 453 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 ATXN8OSP0DMR3 200 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 SLC6A8P48029 635 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 STK11Q15831 433 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 FAM74A1Q5RGS3 127 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 C1orf189Q5VU69 101 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 RHBDD2Q6NTF9 364 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 PAPD4Q6PIY7 484 aaKnown RBP18.32■□□□□ 0.52
SNX3-201ENST00000230085 TIPARPQ7Z3E1 657 aaKnown RBP18.32■□□□□ 0.52
SNX3-201ENST00000230085 PUSL1Q8N0Z8 303 aaKnown RBP18.32■□□□□ 0.52
SNX3-201ENST00000230085 C16orf52Q8NHV5 167 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 C8orf44Q96CB5 159 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 ZNF471Q9BX82 626 aaPredicted RBP18.32■□□□□ 0.52
SNX3-201ENST00000230085 AKIRIN1Q9H9L7 192 aaPredicted RBP18.32■□□□□ 0.52
SNX3-201ENST00000230085 FBLN5Q9UBX5 448 aa18.32■□□□□ 0.52
SNX3-201ENST00000230085 ZNF346Q9UL40 294 aaKnown RBP18.32■□□□□ 0.52
SNX3-201ENST00000230085 DMXL2Q8TDJ6 3036 aa18.31■□□□□ 0.52
SNX3-201ENST00000230085 SLC25A12O75746 678 aa18.31■□□□□ 0.52
SNX3-201ENST00000230085 IL33O95760 270 aa18.31■□□□□ 0.52
SNX3-201ENST00000230085 MT-ATP6P00846 226 aa18.31■□□□□ 0.52
SNX3-201ENST00000230085 HLA-AP01891 365 aaKnown RBP18.31■□□□□ 0.52
SNX3-201ENST00000230085 PAX6P26367 422 aa18.31■□□□□ 0.52
SNX3-201ENST00000230085 PMPCAQ10713 525 aa18.31■□□□□ 0.52
SNX3-201ENST00000230085 ELP2Q6IA86 826 aa18.31■□□□□ 0.52
SNX3-201ENST00000230085 THAP6Q8TBB0 222 aa18.31■□□□□ 0.52
SNX3-201ENST00000230085 PIK3IP1Q96FE7 263 aa18.31■□□□□ 0.52
SNX3-201ENST00000230085 NARS2Q96I59 477 aaKnown RBP18.31■□□□□ 0.52
SNX3-201ENST00000230085 ZNF75AQ96N20 296 aa18.31■□□□□ 0.52
SNX3-201ENST00000230085 AMELYQ99218 206 aa18.31■□□□□ 0.52
SNX3-201ENST00000230085 TSNAXQ99598 290 aaKnown RBP18.31■□□□□ 0.52
SNX3-201ENST00000230085 SLC6A7Q99884 636 aa18.31■□□□□ 0.52
SNX3-201ENST00000230085 IFT22Q9H7X7 185 aa18.31■□□□□ 0.52
SNX3-201ENST00000230085 KCNG2Q9UJ96 466 aa18.31■□□□□ 0.52
SNX3-201ENST00000230085 FBXO9Q9UK97 447 aaPredicted RBP18.31■□□□□ 0.52
SNX3-201ENST00000230085 TMEM184BQ9Y519 407 aaPredicted RBP18.31■□□□□ 0.52
SNX3-201ENST00000230085 BGLAPP02818 100 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 CLPSP04118 112 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 LYL1P12980 280 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 BDKRB2P30411 391 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 RFC3P40938 356 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 MEP1BQ16820 701 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 IL34Q6ZMJ4 242 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 METTL27Q8N6F8 245 aaPredicted RBP18.3■□□□□ 0.52
SNX3-201ENST00000230085 OR5AP2Q8NGF4 316 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 OR1S2Q8NGQ3 325 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 OR8S1Q8NH09 359 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 ZNF519Q8TB69 540 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 PHB2Q99623 299 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 NMES1Q9C002 83 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 OR10A5Q9H207 317 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 SRPK3Q9UPE1 567 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 B9D1Q9UPM9 204 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 VSIG4Q9Y279 399 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 NOP16Q9Y3C1 178 aaKnown RBP18.3■□□□□ 0.52
SNX3-201ENST00000230085 CFAP47Q6ZTR5 3102 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms