RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 GSG1Q2KHT4 349 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 GFOD2Q3B7J2 385 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 FOXL2NBQ6ZUU3 175 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 ABHD12BQ7Z5M8 362 aaPredicted RBP12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 NOXA1Q86UR1 476 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 COMMD2Q86X83 199 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 C20orf196Q8IYI0 205 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 TCTE3Q8IZS6 198 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 ZNF283Q8N7M2 679 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 OR13C9Q8NGT0 318 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 OR10D3Q8NH80 312 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 ULBP2Q9BZM5 246 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 C20orf85Q9H1P6 137 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 NIPAL2Q9H841 368 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 GPR84Q9NQS5 396 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 FLVCR1Q9Y5Y0 555 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 EP300Q09472 2414 aaPredicted RBP12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 ASPMQ8IZT6 3477 aa12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 ZNF716A6NP11 495 aa12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 CELA3AP09093 270 aa12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 NR2C1P13056 603 aa12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 BDKRB2P30411 391 aa12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 GFRA1P56159 465 aa12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 AP3S2P59780 193 aa12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 TRIP6Q15654 476 aaKnown RBP12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 ABHD17BQ5VST6 288 aa12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 LINC00696Q6ZRV3 163 aa12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 OR1M1Q8NGA1 313 aa12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 OR2V1Q8NHB1 315 aa12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 ZNF845Q96IR2 970 aaPredicted RBP12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 SF3B5Q9BWJ5 86 aaKnown RBP12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 OR2B2Q9GZK3 357 aa12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 MOB1AQ9H8S9 216 aa12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 SLC17A5Q9NRA2 495 aa12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 PLSCR3Q9NRY6 295 aa12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 RYDENQ9NUL5 291 aaKnown RBP12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 PCDHGA1Q9Y5H4 931 aa12.71□□□□□ -0.38
PRKAB1-201ENST00000229328 H7C417 338 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 DNPH1O43598 174 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 POU3F2P20265 443 aaPredicted RBP12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 GUCA1AP43080 201 aaPredicted RBP12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 RSPO4Q2I0M5 234 aaPredicted RBP12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 RSPO1Q2MKA7 263 aaPredicted RBP12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 MOGAT2Q3SYC2 334 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 OLFML2AQ68BL7 652 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 JMJD6Q6NYC1 403 aaPredicted RBP12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 ADGRE4PQ86SQ3 457 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 DTX1Q86Y01 620 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 OR2M7Q8NG81 312 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 C15orf40Q8WUR7 153 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 GIMAP1Q8WWP7 306 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 FAM71F1Q96KD3 344 aaPredicted RBP12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 MTFP1Q9UDX5 166 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 ELF5Q9UKW6 265 aaPredicted RBP12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 RTTNQ86VV8 2226 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 MED13Q9UHV7 2174 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 TNFRSF10AO00220 468 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 TPPPO94811 219 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 MRPS15P82914 257 aaKnown RBP12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 ST3GAL2Q16842 350 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 PCGF3Q3KNV8 242 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 ZNF529Q6P280 563 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 NKAIN3Q8N8D7 197 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 PHF21AQ96BD5 680 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 FBXO17Q96EF6 278 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 SPACA5Q96QH8 159 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 OR10A4Q9H209 315 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 PARD6AQ9NPB6 346 aa12.7□□□□□ -0.38
PRKAB1-201ENST00000229328 F5H5K5 113 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 STMND1H3BQB6 276 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 RBBP9O75884 186 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 GABRA1P14867 456 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 PSMB1P20618 241 aaKnown RBP12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 LINC00303Q3SY05 128 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 ATP1A1-AS1Q5TC04 95 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 PLXDC2Q6UX71 529 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 ZNF627Q7L945 461 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 GJC3Q8NFK1 279 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 OR11H7Q8NGC8 314 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 OR4D10Q8NGI6 311 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 OR5D14Q8NGL3 314 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 OR56B4Q8NH76 319 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 SORCS2Q96PQ0 1159 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 UTP23Q9BRU9 249 aaKnown RBP12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 MED28Q9H204 178 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 OR51J1Q9H342 316 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 ZMAT3Q9HA38 289 aaKnown RBP12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 TMEM138Q9NPI0 162 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 PAQR5Q9NXK6 330 aaPredicted RBP12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 MRPS18CQ9Y3D5 142 aaKnown RBP12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 DBHP09172 617 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 GRB2P62993 217 aaKnown RBP12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 HIST1H3AP68431 136 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 OR1C1Q15619 314 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 DMRTC1Q5HYR2 192 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 HIST2H3PS2Q5TEC6 136 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 HIST2H3AQ71DI3 136 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 SULF2Q8IWU5 870 aa12.69□□□□□ -0.38
PRKAB1-201ENST00000229328 NKD1Q969G9 470 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms