RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SDCBPO00560 298 aaPredicted RBP16.64■□□□□ 0.25
CLIP2-201ENST00000223398 POU3F3P20264 500 aaPredicted RBP16.64■□□□□ 0.25
CLIP2-201ENST00000223398 GPM6AP51674 278 aa16.64■□□□□ 0.25
CLIP2-201ENST00000223398 PCBP4P57723 403 aaKnown RBP16.64■□□□□ 0.25
CLIP2-201ENST00000223398 TCFL5Q9UL49 500 aa16.64■□□□□ 0.25
CLIP2-201ENST00000223398 KCNJ8Q15842 424 aa16.64■□□□□ 0.25
CLIP2-201ENST00000223398 PRSS35Q8N3Z0 413 aa16.64■□□□□ 0.25
CLIP2-201ENST00000223398 FBXO34Q9NWN3 711 aa16.64■□□□□ 0.25
CLIP2-201ENST00000223398 FER1L6Q2WGJ9 1857 aa16.64■□□□□ 0.25
CLIP2-201ENST00000223398 MEX3AA1L020 520 aaKnown RBP16.64■□□□□ 0.25
CLIP2-201ENST00000223398 TMEM235A6NFC5 223 aa16.64■□□□□ 0.25
CLIP2-201ENST00000223398 CPEP16870 476 aa16.64■□□□□ 0.25
CLIP2-201ENST00000223398 GABRA4P48169 554 aa16.64■□□□□ 0.25
CLIP2-201ENST00000223398 FMODQ06828 376 aa16.64■□□□□ 0.25
CLIP2-201ENST00000223398 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.64■□□□□ 0.25
CLIP2-201ENST00000223398 PRICKLE4Q2TBC4 344 aa16.64■□□□□ 0.25
CLIP2-201ENST00000223398 CISD2Q8N5K1 135 aaKnown RBP16.64■□□□□ 0.25
CLIP2-201ENST00000223398 SP7Q8TDD2 431 aaPredicted RBP16.64■□□□□ 0.25
CLIP2-201ENST00000223398 TRMT61AQ96FX7 289 aaKnown RBP16.64■□□□□ 0.25
CLIP2-201ENST00000223398 CHATP28329 748 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 SOX18P35713 384 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 RAB13P51153 203 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 PLPPR2Q96GM1 343 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 TRABD2BA6NFA1 517 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 EML2O95834 649 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 SSTP61278 116 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 C3AR1Q16581 482 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 OR10D3Q8NH80 312 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 ST8SIA4Q92187 359 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 ZNF2Q9BSG1 426 aaPredicted RBP16.63■□□□□ 0.25
CLIP2-201ENST00000223398 RANGRFQ9HD47 186 aaPredicted RBP16.63■□□□□ 0.25
CLIP2-201ENST00000223398 COPS3Q9UNS2 423 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 A0A0B4J203 849 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 FADS1O60427 444 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 MOSPD3O75425 235 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 EGR3Q06889 387 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 ZNF74Q16587 644 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 FAM213BQ8TBF2 198 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 POFUT1Q9H488 388 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 ISG20L2Q9H9L3 353 aaKnown RBP16.63■□□□□ 0.25
CLIP2-201ENST00000223398 NKX2-2O95096 273 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 SIX6O95475 246 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 SH2D5Q6ZV89 423 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 PRDM6Q9NQX0 595 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 RNF150Q9ULK6 438 aa16.63■□□□□ 0.25
CLIP2-201ENST00000223398 TCRBP04435 133 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 DOC2BQ14184 412 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 SYT6Q5T7P8 510 aaPredicted RBP16.62■□□□□ 0.25
CLIP2-201ENST00000223398 RHBDD2Q6NTF9 364 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 SEC22CQ9BRL7 303 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 TCRBV5S2A0A599 114 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 CCSO14618 274 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 POU2F2P09086 479 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 CT62P0C5K7 136 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 RPS16P62249 146 aaKnown RBP16.62■□□□□ 0.25
CLIP2-201ENST00000223398 BTLAQ7Z6A9 289 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 TPPP3Q9BW30 176 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 AADACP22760 399 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 APOBEC4Q8WW27 367 aaKnown RBP16.62■□□□□ 0.25
CLIP2-201ENST00000223398 PSD2Q9BQI7 771 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 ZNF225Q9UK10 706 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 GPANK1O95872 356 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 AVPR2P30518 371 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 IL34Q6ZMJ4 242 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 KLHDC8BQ8IXV7 354 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 RAP2BP61225 183 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 LGI3Q8N145 548 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 HSD17B11Q8NBQ5 300 aa16.62■□□□□ 0.25
CLIP2-201ENST00000223398 MRPS24Q96EL2 167 aaKnown RBP16.62■□□□□ 0.25
CLIP2-201ENST00000223398 EPOPA6NHQ4 379 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 CATSPERDQ86XM0 798 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 GABRG1Q8N1C3 465 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 GABARAPL3Q9BY60 117 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 PLA2G12AQ9BZM1 189 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 RNF32Q9H0A6 362 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 POLR2AP24928 1970 aaKnown RBP16.61■□□□□ 0.25
CLIP2-201ENST00000223398 OR10A3P58181 314 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 SLC38A9Q8NBW4 561 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 C11orf54Q9H0W9 315 aaPredicted RBP16.61■□□□□ 0.25
CLIP2-201ENST00000223398 DUSP15Q9H1R2 295 aaPredicted RBP16.61■□□□□ 0.25
CLIP2-201ENST00000223398 IGHV5-10-1A0A0J9YXX1 117 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 LINC01387J3KSC0 135 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 CCL2P13500 99 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 MESP2Q0VG99 397 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 ZNF626Q68DY1 528 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 NUDCD2Q8WVJ2 157 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 PINX1Q96BK5 328 aaKnown RBP16.61■□□□□ 0.25
CLIP2-201ENST00000223398 AP1S3Q96PC3 154 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 OPA3Q9H6K4 179 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 ST3GAL6Q9Y274 331 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 NME2P22392 152 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 RAB5BP61020 215 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 RHOUQ7L0Q8 258 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 OR2AK2Q8NG84 335 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 OR1F12Q8NHA8 337 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 C20orf85Q9H1P6 137 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 A4GNTQ9UNA3 340 aa16.61■□□□□ 0.25
CLIP2-201ENST00000223398 A0A1W2PQF6 199 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 H3BMH7 237 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 ANGPTL7O43827 346 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms