RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 EDEM2Q9BV94 578 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 CMC2Q9NRP2 79 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 GLRA1P23415 457 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 PAX6P26367 422 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 C6orf15Q6UXA7 325 aaPredicted RBP12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 RPS19BP1Q86WX3 136 aaKnown RBP12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 NRASP01111 189 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 OPN1MWP04001 364 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 OPN1MW2P0DN77 364 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 OPN1MW3P0DN78 364 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 ARL16Q0P5N6 197 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 ZNF239Q16600 458 aaKnown RBP12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 CCDC74BQ96LY2 380 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 M0R135 149 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 AVPR2P30518 371 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 PIGPP57054 158 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 FMODQ06828 376 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 ZNF799Q96GE5 643 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 LYRM4Q9HD34 91 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 CRYM-AS1A6NIL9 109 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 NKX6-3A6NJ46 265 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 GPR37O15354 613 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 OR2J3O76001 311 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 ZNF266Q14584 549 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 CD300LGQ6UXG3 332 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 CNRIP1Q96F85 164 aaPredicted RBP12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 GABARAPL3Q9BY60 117 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 PLCH1Q4KWH8 1693 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 HLA-HP01893 362 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 CLDN15P56746 228 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 DOK3Q7L591 496 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 SLC17A4Q9Y2C5 497 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 RCL1Q9Y2P8 373 aaKnown RBP12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 TMEM265A0A087WTH1 108 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 ZNHIT1O43257 154 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 CD27P26842 260 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 ZNF133P52736 654 aaPredicted RBP12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 FOXF1Q12946 379 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 NKAIN3Q8N8D7 197 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 AKR1E2Q96JD6 320 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 TNFRSF19Q9NS68 423 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 PHYHD1Q5SRE7 291 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 C15orf54Q8N8G6 183 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 OR4C16Q8NGL9 310 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 BAHD1Q8TBE0 780 aaPredicted RBP12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 NANPQ8TBE9 248 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 PRSS37A4D1T9 235 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 LALBAP00709 142 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 C1QBP02746 253 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 KIR2DL3P43628 341 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 GNG10P50151 68 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 DUSP8Q13202 625 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 LINC00303Q3SY05 128 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 OR6K3Q8NGY3 331 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 TXN2Q99757 166 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 PRELID3BQ9Y3B1 194 aa12.32□□□□□ -0.44
TGFBR3-201ENST00000212355 PYCARD-AS1I3L0S3 204 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 EIF1BO60739 113 aaKnown RBP12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 DMWDQ09019 674 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 PRSS35Q8N3Z0 413 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 RIMS4Q9H426 269 aaPredicted RBP12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 SMOC1Q9H4F8 434 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 SERGEFQ9UGK8 458 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 HOXC11O43248 304 aaPredicted RBP12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 CST7O76096 145 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 HBE1P02100 147 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 CCL7P80098 99 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 RBPJQ06330 500 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 ELAVL1Q15717 326 aaKnown RBP12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 RPUSD3Q6P087 351 aaKnown RBP12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 OR2L13Q8N349 312 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 SIGLEC11Q96RL6 698 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 ARRDC1-AS1Q9H2J1 176 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 C20orf141Q9NUB4 165 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 FBXO34Q9NWN3 711 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 UBE2L5PA0A1B0GUS4 154 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 OR6C68A6NDL8 312 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 KLRC4-KLRK1H3BQV0 150 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 CT45A6P0DMU7 189 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 CT45A5P0DMU8 189 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 CT45A7P0DMV0 189 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 CT45A8P0DMV1 189 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 CT45A9P0DMV2 189 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 APOBEC1P41238 236 aaKnown RBP12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 RAE1P78406 368 aaKnown RBP12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 OXA1LQ15070 435 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 CT45A2Q5DJT8 189 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 CT45A1Q5HYN5 189 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 CT45A3Q8NHU0 189 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 RPP25Q9BUL9 199 aaKnown RBP12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 PLEKHF2Q9H8W4 249 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 MAST2Q6P0Q8 1798 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 CELA2BP08218 269 aaPredicted RBP12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 CHRNB4P30926 498 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 GPR12P47775 334 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 PPP1CAP62136 330 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 OR8B4Q96RC9 309 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 MMACHCQ9Y4U1 282 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 TOGARAM1Q9Y4F4 1720 aa12.31□□□□□ -0.44
TGFBR3-201ENST00000212355 TMEM129A0AVI4 362 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms