RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 RPS2P15880 293 aaKnown RBP13.26□□□□□ -0.29
ERCC1-201ENST00000013807 IFNGR2P38484 337 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 PSMB10P40306 273 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 GNB2P62879 340 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 TSPAN31Q12999 210 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 SPATS1Q496A3 300 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 ZNF362Q5T0B9 420 aaPredicted RBP13.26□□□□□ -0.29
ERCC1-201ENST00000013807 SHISA2Q6UWI4 295 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 BTNL3Q6UXE8 466 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 ZNF841Q6ZN19 808 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 ZNF620Q6ZNG0 422 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 MOGAT3Q86VF5 341 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 JAZF1Q86VZ6 243 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 PLPP7Q8NBV4 271 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 OR52E2Q8NGJ4 325 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 OR4K13Q8NH42 304 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 PITX2Q99697 317 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 ELAC2Q9BQ52 826 aaKnown RBP13.26□□□□□ -0.29
ERCC1-201ENST00000013807 SLC22A4Q9H015 551 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 ZNF696Q9H7X3 374 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 RPRD1BQ9NQG5 326 aaKnown RBP13.26□□□□□ -0.29
ERCC1-201ENST00000013807 MRPL22Q9NWU5 206 aaKnown RBP13.26□□□□□ -0.29
ERCC1-201ENST00000013807 ADA2Q9NZK5 511 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 F5H5K5 113 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 PHYHO14832 338 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 SNX3O60493 162 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 MTNR1AP48039 350 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 BPIFB3P59826 476 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 TRAP1Q12931 704 aaKnown RBP13.25□□□□□ -0.29
ERCC1-201ENST00000013807 CLEC12AQ5QGZ9 265 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 DCDC5Q6ZRR9 648 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 NLRC3Q7RTR2 1065 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 NAA40Q86UY6 237 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 PGAM4Q8N0Y7 254 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 PARP8Q8N3A8 854 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 RNF148Q8N7C7 305 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 BHLHE23Q8NDY6 225 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 SLC25A28Q96A46 364 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 MAP6Q96JE9 813 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 IFT27Q9BW83 186 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 IL20Q9NYY1 176 aa13.25□□□□□ -0.29
ERCC1-201ENST00000013807 POM121CA8CG34 1229 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 BHLHE40O14503 412 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 TNFRSF13BO14836 293 aaPredicted RBP13.24□□□□□ -0.29
ERCC1-201ENST00000013807 TMPRSS2O15393 492 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 OR10H3O60404 316 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 KRT36O76013 467 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 ZNF205O95201 554 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 HLA-DPB1P04440 258 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 IGHV4-38-2P0DP08 117 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 NOS3P29474 1203 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 CENPAP49450 140 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 TPTEP56180 551 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 SPIBQ01892 262 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 MALLQ13021 153 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 BAMBIQ13145 260 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 SLC9A3R2Q15599 337 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 PCK2Q16822 640 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 SAMD4BQ5PRF9 694 aaKnown RBP13.24□□□□□ -0.29
ERCC1-201ENST00000013807 RPL13AP3Q6NVV1 102 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 PGBD2Q6P3X8 592 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 PGAP1Q75T13 922 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 LINC00346Q8IVM7 164 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 OR8B3Q8NGG8 313 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 OR10S1Q8NGN2 331 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 OR2AJ1Q8NGZ0 328 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 GNPDA2Q8TDQ7 276 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 MCUR1Q96AQ8 359 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 OR8B2Q96RD0 313 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 CDADC1Q9BWV3 514 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 MS4A7Q9GZW8 240 aaPredicted RBP13.24□□□□□ -0.29
ERCC1-201ENST00000013807 NSRP1Q9H0G5 558 aaKnown RBP13.24□□□□□ -0.29
ERCC1-201ENST00000013807 WDR76Q9H967 626 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 NOP16Q9Y3C1 178 aaKnown RBP13.24□□□□□ -0.29
ERCC1-201ENST00000013807 PCDHGB1Q9Y5G3 927 aa13.24□□□□□ -0.29
ERCC1-201ENST00000013807 M0R135 149 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 GMDSO60547 372 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 LCATP04180 440 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 FABP3P05413 133 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 RRM2P31350 389 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 PITPNBP48739 271 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 NPY4RP50391 375 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 IL13RA1P78552 427 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 C11orf91Q3C1V1 193 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 WDR25Q64LD2 544 aaPredicted RBP13.23□□□□□ -0.29
ERCC1-201ENST00000013807 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.23□□□□□ -0.29
ERCC1-201ENST00000013807 LINC00471Q8N535 108 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 FITM2Q8N6M3 262 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 SDR9C7Q8NEX9 313 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 SLCO4A1Q96BD0 722 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 ZNF799Q96GE5 643 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 NSMCE2Q96MF7 247 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 TRIM15Q9C019 465 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 CLN8Q9UBY8 286 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 TMCC3Q9ULS5 477 aa13.23□□□□□ -0.29
ERCC1-201ENST00000013807 WNK1Q9H4A3 2382 aa13.22□□□□□ -0.29
ERCC1-201ENST00000013807 CD300LBA8K4G0 201 aa13.22□□□□□ -0.29
ERCC1-201ENST00000013807 ARPC2O15144 300 aa13.22□□□□□ -0.29
ERCC1-201ENST00000013807 ATP8B1O43520 1251 aa13.22□□□□□ -0.29
ERCC1-201ENST00000013807 IRF2P14316 349 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms