RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Mic13Q8R404 119 aaKnown RBP10.47□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Olfr849Q8VFF6 312 aa10.47□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Ccnl2Q9JJA7 518 aa10.47□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Prob1A0A087WR45 1010 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Usp36B1AQJ2 1098 aaKnown RBP10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Ogg1O08760 345 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Opn1mwO35599 359 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Irf1P15314 329 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Pax2P32114 414 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Foxa3P35584 353 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Rab11bP46638 218 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Slc39a12Q5FWH7 689 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 4930438A08RikQ5SPH3 536 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Epha6Q62413 1035 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Tmem158Q6F5E0 286 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Med16Q6PGF3 828 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 LcorQ6ZPI3 433 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Klhl9Q6ZPT1 617 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Olfr1286Q7TQY2 305 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Gm21627Q810R0 219 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Plppr1Q8BFZ2 325 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Nudt9Q8BVU5 350 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Pqlc2Q8C4N4 293 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Olfr131Q8VGC8 314 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Mrgpra4Q91WW2 313 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Dusp22Q99N11 184 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Slc2a8Q9JIF3 477 aa10.46□□□□□ -0.73
Col9a1-202ENSMUST00000088349 Ighv16-1A0A0A6YW39 117 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Gm29797A0A140LIA7 188 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Gm42517A0A1Y7VLQ2 374 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Vmn1r137D3YTY1 307 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Vmn1r143E9PUW9 307 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Vmn1r157E9Q069 297 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Vmn1r139E9Q8L6 297 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Vmn1r112G3UY48 297 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Gm21411J3KMS0 136 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Vmn1r135K9J7G0 307 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Vmn1r125L7N227 307 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Vmn1r116L7N2A6 307 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 GzmdP11033 252 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 GipP48756 144 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Rcor3Q6PGA0 451 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 HhipQ7TN16 700 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Tas2r136Q7TQA8 305 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Olfr1168Q7TR25 312 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Olfr1061Q7TR72 313 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Stk35Q80ZW0 539 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Fbxw13Q8BI57 466 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 F830045P16RikQ8BJ95 487 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Cdhr3Q8BL00 831 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 LssQ8BLN5 733 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Srpx2Q8R054 468 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Apbb3Q8R1C9 486 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Pno1Q9CPS7 248 aaKnown RBP10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Vmn1r100Q9EPS5 307 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Lime1Q9EQR5 269 aa10.46□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Gpr155A2AWR3 868 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Gm11168J3QN50 228 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 MpoP11247 718 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Ca3P16015 260 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Ggta1P23336 394 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Mst1P26928 716 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Lefty2P57785 368 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Fv1P70213 459 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Stx4P70452 298 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 FapP97321 761 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Col10a1Q05306 680 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Mmp25Q3U435 615 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Drd1Q61616 446 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Olfr1126Q7TR49 314 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Bhlhe23Q8BGW3 223 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Tm6sf2Q8R1J1 378 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Abhd14bQ8VCR7 210 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Wdr13Q91V09 485 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Acy3Q91XE4 318 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Fam96bQ9D187 163 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Fzd5Q9EQD0 585 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Taf8Q9EQH4 308 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Pusl1A2ADA5 291 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Tmem185aA2AF53 350 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Skint10A7TZG1 354 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Gm8888J3QPX5 126 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Vmn1r120K7N6J6 305 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Grap2O89100 322 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 P01661 131 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 P01662 111 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 P01663 111 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 SparcP07214 302 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Psg26Q4KL65 475 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Zfp157Q6PCM4 567 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Olfr884Q7TRE1 309 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Olfr776Q7TRI3 312 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Olfr285Q7TS17 319 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 C730034F03RikQ8BGL5 111 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Cggbp1Q8BHG9 167 aaKnown RBP10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 BphlQ8R164 291 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Vmn1r208Q8R275 308 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Vmn1r17Q8R2D8 303 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Olfr1424Q8VFV1 313 aa10.45□□□□□ -0.74
Col9a1-202ENSMUST00000088349 Olfr676Q8VGZ9 317 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms