RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Taar8aQ5QD07 344 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Slc17a1Q61983 465 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 LipkQ8BM14 398 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Reep4Q8K072 257 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Tmem150bQ8R218 238 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Chrnb4Q8R493 495 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr827Q8VEV5 322 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Nkain4Q9JMG4 208 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Skint9A7TZG3 319 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gm9972E9Q053 102 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Vmn2r82G3UWA2 865 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Kcnk4O88454 398 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Adrb2P18762 418 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Rpl27P61358 136 aaKnown RBP9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gm5113Q3UGK8 141 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Tfap2eQ6VUP9 442 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr1394Q8VET2 312 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Plpp6Q9D4F2 292 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Cx3cr1Q9Z0D9 354 aa9.62□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr1205A2ATJ7 307 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Zfp934K7N6H3 473 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Tnfrsf1aP25118 454 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Bmp8aP34821 399 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Etv2P41163 335 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Bmp8bP55105 399 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Ckap5A2AGT5 2032 aaKnown RBP9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Zfp160E9Q459 650 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Vmn2r89O35199 507 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 DmknQ6P253 517 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Fam109aQ8BH49 266 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Rbm45Q8BHN5 476 aaKnown RBP9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Fbxw13Q8BI57 466 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 CenpmQ9CQA0 180 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Snapc3Q9D2C9 407 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Q9D5Y0 588 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr1255A2AUA4 310 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Id1P20067 168 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 RidaP52760 135 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 CdaP56389 146 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Rasd2P63032 266 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Xkr7Q5GH64 580 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Tctex1d2Q9CQ66 144 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Cdca4Q9CWM2 237 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 PipoxQ9D826 390 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Galnt16Q9JJ61 558 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Zfp40B1B1D3 796 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 H60cB1B213 197 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 H2-T10F6T1I5 379 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Kirrel2Q7TSU7 700 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Bud23Q9CY21 281 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gm9817Q9D2M0 144 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Lrrc51Q9DAK8 192 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Dock1Q8BUR4 1865 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gm438B1ASB3 393 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gm6665F6Y363 85 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Vmn1r58G3X9U3 310 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Hoxb5P09079 269 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Htr5aP30966 357 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr145Q60882 310 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Marveld1Q7TQJ1 173 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 RinlQ80UW3 563 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Znf775Q8BI73 538 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Zfp286Q8C0E6 519 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 StradbQ8K4T3 418 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 P01670 111 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 P01671 111 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 P01672 111 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gm5039J3QNT6 144 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr117L7N1Z1 317 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Klf4Q60793 483 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 St8sia3Q64689 380 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr130Q8VFC1 317 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Aig1Q9D8B1 262 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Scn5aQ9JJV9 2019 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Trbv2A0A0B4J1G8 114 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 MiipA2A7Y5 387 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Zfp987Q32P14 633 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 SrmsQ62270 496 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gal3st2Q6XQH0 394 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr917Q7TRC3 309 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Vmn1r75Q8R289 305 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Vmn1r53Q9EP93 310 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gm20518E9Q548 580 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 MagP20917 626 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Cdv3Q4VAA2 281 aaKnown RBP9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Bap18Q9DCT6 171 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 ItgaxQ9QXH4 1169 aa9.61□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Znf106O88466 1888 aa9.6□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Mfsd4b5E9PYY6 479 aa9.6□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gm21738J3QP72 227 aa9.6□□□□□ -0.87
Scn8a-201ENSMUST00000082209 P2rx6O54803 389 aa9.6□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Cldn2O88552 230 aa9.6□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gtdc1Q8BW56 445 aa9.6□□□□□ -0.87
Scn8a-201ENSMUST00000082209 FastkQ9JIX9 511 aa9.6□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gab1Q9QYY0 695 aa9.6□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Exo1Q9QZ11 837 aa9.6□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Csf2raQ00941 388 aa9.6□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr804Q7TRH7 314 aa9.6□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Mblac1Q8BWY4 260 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 47.8 ms