RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Olfr1132Q8VG97 308 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Mat1aQ91X83 396 aaKnown RBP13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 1700034E13RikQ9D2T6 108 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Dmrtc1c1Q9D410 238 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Ca13Q9D6N1 262 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Chrm2Q9ERZ4 466 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 BlnkQ9QUN3 457 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Gdf15Q9Z0J7 303 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 PthQ9Z0L6 115 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Igkv15-103A0A140T8P3 115 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Gm6890A2BG94 208 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Skint7A7XV04 395 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Gm4778L7N229 365 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 P01634 136 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 HexaP29416 528 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Kcnj3P63250 501 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Cd80Q00609 306 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Prss55Q14BX2 321 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Rnf180Q3U827 592 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Vdac3Q60931 283 aaKnown RBP13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Olfr290Q7TS13 315 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Kiaa1456Q80WQ4 447 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Znf8Q8BGV5 572 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Psmf1Q8BHL8 271 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Gm9999Q8C5Y2 53 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 P2rx2Q8K3P1 485 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Srpx2Q8R054 468 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Gtf2f2Q8R0A0 249 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Mitd1Q8VDV8 249 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Olfr291Q8VF60 317 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Col26a1Q91VF6 440 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Taar1Q923Y8 332 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Mgst3Q9CPU4 153 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 PigkQ9CXY9 395 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Akr1a1Q9JII6 325 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Spry1Q9QXV9 313 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Snrnp200Q6P4T2 2136 aaKnown RBP13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gm17677B3GLJ5 116 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gm21411J3KMS0 136 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Wsb1O54927 421 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Esp1Q3LHH8 102 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gas6Q61592 674 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Phox2aQ62066 280 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Kyat3Q71RI9 455 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Slc22a18Q78KK3 406 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 HhipQ7TN16 700 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Olfr1212Q7TR08 311 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 NagpaQ8BJ48 517 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 LmlnQ8BMN4 681 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Slc25a45Q8CFJ7 288 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Nrif2Q921B4 824 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Hsbp1Q9CQZ1 76 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Otud1Q9CUB6 454 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Xrcc2Q9CX47 278 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Sec11cQ9D8V7 192 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Taf8Q9EQH4 308 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 MeltfQ9R0R1 738 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gm21117A0A087WPJ9 222 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gm20820A0A087WPP3 222 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gm20937A0A087WQA3 222 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gm21258A0A087WQC7 222 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gm21095A0A087WR14 222 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gm20824A0A087WS97 222 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gm29866A0A0A6YX04 222 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Vmn1r124D3YTX4 307 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Mrap2D3Z1Q2 207 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Fam98cE9PYD1 344 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gm5458L7N219 204 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 CfdP03953 259 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Capza1P47753 286 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 CdaP56389 146 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Klhl8P59280 629 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 GnrhrQ01776 327 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Spaca9Q7TPM5 168 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Olfr1211Q7TR09 311 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Olfr1173Q7TR24 312 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Olfr835Q7TRG7 311 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 CcnqQ8QZR8 250 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Vmn1r229Q8R2A9 306 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Rcc1Q8VE37 421 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Ubl7Q91W67 380 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Flvcr2Q91X85 551 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Rnf141Q99MB7 230 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Tmem33Q9CR67 247 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Cnih4Q9CX13 139 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Tomm34Q9CYG7 309 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Nol3Q9D1X0 220 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Prl8a1Q9DAV8 240 aa13.39□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gm21294A0A087WS79 222 aa13.38□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 5430401F13RikE9Q328 175 aa13.38□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Psg20E9Q9B4 475 aa13.38□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Vmn1r67G5E8C1 305 aa13.38□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 MycP01108 439 aa13.38□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Dpp4P28843 760 aa13.38□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Alox5apP30355 161 aa13.38□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 SnrpeP62305 92 aaKnown RBP13.38□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 A4gntQ14BT6 341 aa13.38□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Slc39a7Q31125 476 aa13.38□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Fndc4Q3TR08 231 aa13.38□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Amz2Q400C8 359 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 574.7 ms