RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Samt4Q9D4X6 233 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Bap18Q9DCT6 171 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Znf346Q9R0B7 294 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Rpl23a-ps3A0A140T8M7 156 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gm15446D3Z5Y8 553 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr557E9Q550 322 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Rpl23aP62751 156 aaKnown RBP9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Rhox10Q4TU83 196 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Nufip2Q5F2E7 692 aaKnown RBP9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Slc16a11Q5NC32 447 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Zfp975Q6NVD6 525 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Wdfy2Q8BUB4 400 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Vmn1r21Q8R2C6 297 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr763Q8VGC1 309 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr945Q9EQB5 319 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Hbb-bh2B2RVB7 147 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 IfnabL7MTU6 190 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Grem1O70326 184 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr11Q60890 313 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Prr11Q8BHE0 368 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Zfp3Q8BLB0 497 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Glcci1Q8K3I9 537 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Rdh16f2Q8K3M1 318 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr780Q8VEU0 312 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr1099Q8VG37 312 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ucn3Q924A4 164 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Pmepa1Q9D7R2 260 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Cav2Q9WVC3 162 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gm21731A0A286YDE9 180 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Mllt10O54826 1068 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Pax4P32115 349 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Csrp3P50462 194 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 RidaP52760 135 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Anxa11P97384 503 aaKnown RBP9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gm10644Q3TZG3 87 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Lrrc30Q3UV48 300 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr328Q5NCD3 310 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Sidt1Q6AXF6 827 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 IppkQ6P1C1 489 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Dcaf12Q8BGZ3 453 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Fam124bQ8BLQ0 456 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Zfp286Q8C0E6 519 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Pdlim5Q8CI51 591 aaKnown RBP9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Zcchc14Q8VIG0 956 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Mmp1aQ9EPL5 464 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tmem229aB9EJI9 371 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 SgceO70258 437 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Fcer1gP20491 86 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Dbx1P52950 335 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Slc12a3P59158 1002 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ccdc190Q3URK1 288 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gal3st4Q3V1B8 480 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Prg2Q61878 223 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Glt8d1Q6NSU3 371 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Chst14Q80V53 376 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gpr152Q8BXS7 511 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Mef2cQ8CFN5 474 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 BphlQ8R164 291 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Vmn1r42Q8VBS7 329 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tmem242Q8VCR3 140 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Plet1Q8VEN2 237 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Slc10a6Q9CXB2 373 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Snapc3Q9D2C9 407 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 DynapQ9D7M5 161 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Abhd5Q9DBL9 351 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Nprl2Q9WUE4 380 aa9.4□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gm6880A3KG45 208 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Skint9A7TZG3 319 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 4930522L14RikE9QAG4 666 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rnf148G3X9R7 316 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ifna9P09235 190 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Spi1P17433 272 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ceacam1P31809 521 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 FaslgP41047 279 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 HfeP70387 359 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Npy1rQ04573 382 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 MakQ04859 622 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 UevldQ3U1V6 471 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Taar6Q5QD13 345 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Fbxw22Q5XG67 466 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gpatch2Q7TQC7 527 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Yipf6Q8BR70 236 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Muc20Q8BUE7 656 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Dync2li1Q8K0T2 351 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Kiaa0513Q8R0A7 407 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Sav1Q8VEB2 386 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 CsprsQ99388 208 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 SnapinQ9Z266 136 aa9.4□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Zfc3h1B2RT41 1992 aaKnown RBP9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Pm20d2A3KG59 431 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Zfp712E9PXJ4 705 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Emp3O35912 163 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Lancl1O89112 399 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Csn1s2bP02664 143 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 GzmdP11033 252 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Klk1b5P15945 261 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Mmp2P33434 662 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ptx3P48759 381 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ackr3P56485 362 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Pi15Q8BS03 258 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms