RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Exo1Q9QZ11 837 aa21.32■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Tcrg-V3A0A0G2JEW2 117 aa21.32■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr65A0A1B0GSF4 315 aa21.32■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr1338A2ACY7 313 aa21.32■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Slc25a34A2ADF7 318 aa21.32■■□□□ 1
Sh3rf1-201ENSMUST00000034060 SncaO55042 140 aaKnown RBP21.32■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Gdf7P43029 461 aa21.32■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Hmx2P43687 273 aa21.32■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Opn5Q6VZZ7 377 aa21.32■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Slc25a42Q8R0Y8 318 aa21.32■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Phyhd1Q9DB26 291 aa21.32■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Zfp988F6VKC7 633 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Wsb2O54929 404 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Il7rP16872 459 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 SrmQ64674 302 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr512Q8VFZ4 326 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Mrgpra7Q91ZC5 305 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Dmbx1Q91ZK4 381 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 4933407L21RikQ9D476 131 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Cldn12Q9ET43 244 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Scgb1b10A0A087WPW0 93 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Serf1O88892 62 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Ccdc115Q8VE99 180 aaKnown RBP21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 2610044O15Rik8A0A087WRJ1 410 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 1700023F06RikA2AB62 382 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr1018A2ASV3 311 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Ms4a7E9Q9V5 267 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Prdx6O08709 224 aaKnown RBP21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Ifna5P07349 189 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Il20raQ6PHB0 546 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Marveld1Q7TQJ1 173 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr360Q8VFP3 317 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Q9CQT9 129 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Scp2d1Q9DAH1 156 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Gm14403A2BFU4 402 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Htr5aP30966 357 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Nkx2-6P43688 289 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Ube2iP63280 158 aaKnown RBP21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Fpr-rs7Q71MR7 338 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 RfxapQ8VCG9 231 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Fgf22Q9ESS2 162 aa21.31■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr1205A2ATJ7 307 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Taar2Q5QD17 339 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr201Q7TS38 308 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Mfsd11Q8BJ51 449 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Trp53tg5Q9D976 238 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Syt13Q9EQT6 426 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Aloxe3Q9WV07 711 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr125Q14AJ9 320 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Vmn1r42Q8VBS7 329 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Asb9Q91ZT8 290 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Klhdc8bQ9D2D9 354 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Alkbh4Q9D8F1 300 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Slc46a3Q9DC26 460 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Kcnk5Q9JK62 502 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Prss1Q9Z1R9 246 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr1124A2AT86 318 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Tcstv3O70518 169 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 RelP15307 587 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 RanP62827 216 aaKnown RBP21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Lpar5Q149R9 372 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr1065Q7TR70 313 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Map6Q7TSJ2 906 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Washc3Q9CR27 194 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Fam90a1aA2A4E2 429 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Gm43720E0CXM8 267 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Alx4O35137 399 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Prl8a2O54832 240 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 PtgirP43252 415 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Thsd4Q3UTY6 1018 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Mboat1Q8BH98 492 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Mob1aQ921Y0 216 aa21.3■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Wfdc16A2A5H4 111 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Etv2P41163 335 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Fam221aQ8C790 301 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Alkbh3Q8K1E6 286 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Agfg1Q8K2K6 561 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Sgo1Q9CXH7 517 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Znrf4Q9DAH2 327 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 CalyQ9DCA7 226 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Ctxn2Q3URE8 81 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Cpeb2Q812E0 521 aaKnown RBP21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Ppm1dQ9QZ67 598 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Esp16A8R0U9 85 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Fahd2Q3TC72 313 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Mef2aQ60929 498 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr646Q8VGW2 312 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Spred1Q924S8 444 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Sntb1Q99L88 537 aaKnown RBP21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Mfsd4b2Q9D8I5 366 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Cd300cA2A7V7 229 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Morn1A2RTS7 477 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Cbr2P08074 244 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Lkaaear1Q8BIG2 198 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Mblac1Q8BWY4 260 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Nkx2-4Q9EQM3 354 aa21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Hapln1Q9QUP5 356 aaKnown RBP21.29■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Kiaa1324A2AFS3 1009 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Gm9047B9EJX3 177 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 P01800 113 aa21.28■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms