RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Gm5475D3YV11 175 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Wdr25E9Q349 535 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Ankrd53Q3V0J4 497 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr1111Q7TR55 312 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Dcaf12l2Q8BGW4 469 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Ppp1r3bQ8C767 284 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr646Q8VGW2 312 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Tp73Q9JJP2 631 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 PtgesQ9JM51 153 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Qtrt1Q9JMA2 403 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 1700023F06RikA2AB62 382 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gm5286E0CXI6 357 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Bcl7cO08664 217 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 P01668 110 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 GhrhrP32082 423 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Lin28bQ45KJ6 247 aaKnown RBP9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Mvb12aQ78HU3 271 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr728Q7TRM6 311 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr1284Q8VF29 311 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr410Q8VFX7 315 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr402Q8VFX8 315 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Siglec5Q920G3 569 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Tmbim7Q9D592 302 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Dnajc4Q9D844 244 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 PthQ9Z0L6 115 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Mecp2Q9Z2D6 484 aaKnown RBP9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gm3550W4VSN7 160 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Irs2P81122 1321 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Nxpe3B9EKK6 559 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr544E9PX47 334 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 ThbdP15306 577 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Pax2P32114 414 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 CbfbQ08024 187 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Fndc4Q3TR08 231 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Cobll1Q3UMF0 1273 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gpr137Q80ZU9 396 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Lpar4Q8BLG2 370 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gjc2Q8BQU6 440 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Egln2Q91YE2 419 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Cd209cQ91ZW9 178 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 HypmQ9CR04 117 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Elovl4Q9EQC4 312 aa9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Arpc3Q9JM76 178 aaKnown RBP9.34□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Zfc3h1B2RT41 1992 aaKnown RBP9.34□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Gm42420A0A0J9YUQ2 99 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Tmed7D3YZZ5 224 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Gm1123Q1RME4 390 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Fut10Q5F2L2 481 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 SpartQ8R1X6 671 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Vmn1r211Q8R266 298 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr512Q8VFZ4 326 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr639Q8VGY8 316 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr971Q9EQ96 307 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 H2al1oL7MU04 110 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Mas1P30554 324 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Cox14Q8BH51 57 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Spata33Q8C624 132 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Glcci1Q8K3I9 537 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr1411Q8VFC4 323 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr96Q8VFE3 313 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr868Q8VFI8 309 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 4933400A11RikQ9CR52 288 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr588-ps1A0A1B0GSZ2 313 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr653E9PVA0 317 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 H2-T23P06339 357 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Tyrp1P07147 537 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Hmx3P42581 356 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Ube2mP61082 183 aaKnown RBP9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Acp5Q05117 327 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr1357Q7TQU7 313 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 LmlnQ8BMN4 681 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Gm10600Q8BQ57 223 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 IdnkQ8R0J8 184 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Calhm5Q8R100 309 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Asb18Q8VHA6 467 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 PnpoQ91XF0 261 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Wdr6Q99ME2 1125 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Vmn1r65Q9EPS7 332 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Gm14403A2BFU4 402 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Rpl12P35979 165 aaKnown RBP9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Acsf3Q3URE1 583 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr201Q7TS38 308 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Fam98bQ80VD1 429 aaKnown RBP9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Arrb1Q8BWG8 418 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Nrn1lQ8C4W3 162 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Vmn1r87Q8R255 295 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr509Q8VF20 321 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Mrgpra7Q91ZC5 305 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Vmn1r56Q9EPS9 310 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Zfp109A0A0U1RPC5 652 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Gm11634A0A1B0GSX1 172 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Olfr1109A2AT96 312 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Tex45G3XA23 500 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Vmn1r120K7N6J6 305 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 HpnO35453 436 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Csnk1a1Q8BK63 337 aaKnown RBP9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Vmn1r19Q8R2C7 308 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Acaa1bQ8VCH0 424 aa9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Acaa1aQ921H8 424 aaKnown RBP9.33□□□□□ -0.92
Ubr1-201ENSMUST00000028728 Alkbh7Q9D6Z0 221 aa9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 62.6 ms