RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ACSM4P0C7M7 580 aa14.97□□□□□ -0.01
PNKP-230ENST00000638016 LIPAP38571 399 aa14.97□□□□□ -0.01
PNKP-230ENST00000638016 CRMP1Q14194 572 aa14.97□□□□□ -0.01
PNKP-230ENST00000638016 MICAQ29983 383 aa14.97□□□□□ -0.01
PNKP-230ENST00000638016 FAM98BQ52LJ0 330 aaKnown RBP14.97□□□□□ -0.01
PNKP-230ENST00000638016 PGM2L1Q6PCE3 622 aa14.97□□□□□ -0.01
PNKP-230ENST00000638016 TMEM179BQ7Z7N9 219 aa14.97□□□□□ -0.01
PNKP-230ENST00000638016 ADGRG5Q8IZF4 528 aa14.97□□□□□ -0.01
PNKP-230ENST00000638016 PROKR2Q8NFJ6 384 aa14.97□□□□□ -0.01
PNKP-230ENST00000638016 PTP4A1Q93096 173 aa14.97□□□□□ -0.01
PNKP-230ENST00000638016 ASB9Q96DX5 294 aa14.97□□□□□ -0.01
PNKP-230ENST00000638016 GAL3ST1Q99999 423 aa14.97□□□□□ -0.01
PNKP-230ENST00000638016 REEP1Q9H902 201 aa14.97□□□□□ -0.01
PNKP-230ENST00000638016 FAM53CQ9NYF3 392 aa14.97□□□□□ -0.01
PNKP-230ENST00000638016 CGGBP1Q9UFW8 167 aaPredicted RBP14.97□□□□□ -0.01
PNKP-230ENST00000638016 RAC2P15153 192 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 SELEP16581 610 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 TRAP1Q12931 704 aaKnown RBP14.96□□□□□ -0.01
PNKP-230ENST00000638016 ZMAT1Q5H9K5 638 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 FAHD2BQ6P2I3 314 aaPredicted RBP14.96□□□□□ -0.01
PNKP-230ENST00000638016 FBXW12Q6X9E4 464 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 IQCF1Q8N6M8 205 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 ZNF511Q8NB15 262 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 OR10G2Q8NGC3 310 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 SPATA3Q8NHX4 192 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 ZNF420Q8TAQ5 688 aaPredicted RBP14.96□□□□□ -0.01
PNKP-230ENST00000638016 TMEM158Q8WZ71 300 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 RAB1CQ92928 201 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 APOBEC3DQ96AK3 386 aaPredicted RBP14.96□□□□□ -0.01
PNKP-230ENST00000638016 FAHD2AQ96GK7 314 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 TIMD4Q96H15 378 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 OR2V2Q96R30 315 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 ATF6BQ99941 703 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 CDADC1Q9BWV3 514 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 METTL17Q9H7H0 456 aaPredicted RBP14.96□□□□□ -0.01
PNKP-230ENST00000638016 G6PC2Q9NQR9 355 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 TMEM106BQ9NUM4 274 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 COMMD3-BMI1R4GMX3 469 aa14.96□□□□□ -0.01
PNKP-230ENST00000638016 MLNRO43193 412 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 RGS9O75916 674 aaPredicted RBP14.95□□□□□ -0.02
PNKP-230ENST00000638016 IGHV2-70P01814 119 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 RGS6P49758 472 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 SLC36A3Q495N2 470 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 ACSM5Q6NUN0 579 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 RPL13AP3Q6NVV1 102 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 COLCA1Q6ZS62 124 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 HS3ST5Q8IZT8 346 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 LNX2Q8N448 690 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 ATG16L2Q8NAA4 619 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 OR2AJ1Q8NGZ0 328 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 CANT1Q8WVQ1 401 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 LRGUKQ96M69 825 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 SIGLEC11Q96RL6 698 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 DIRC2Q96SL1 478 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 RBM4Q9BWF3 364 aaKnown RBP14.95□□□□□ -0.02
PNKP-230ENST00000638016 CHID1Q9BWS9 393 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 HCAR1Q9BXC0 346 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 C1QTNF5Q9BXJ0 243 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 DGCR6LQ9BY27 220 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 MED20Q9H944 212 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 NPTNQ9Y639 398 aa14.95□□□□□ -0.02
PNKP-230ENST00000638016 LOC105371242A0A075B767 164 aa14.94□□□□□ -0.02
PNKP-230ENST00000638016 ZNF205O95201 554 aa14.94□□□□□ -0.02
PNKP-230ENST00000638016 HLA-DPB1P04440 258 aa14.94□□□□□ -0.02
PNKP-230ENST00000638016 SBK2P0C263 348 aa14.94□□□□□ -0.02
PNKP-230ENST00000638016 RAP2AP10114 183 aa14.94□□□□□ -0.02
PNKP-230ENST00000638016 SEC61A1P61619 476 aaKnown RBP14.94□□□□□ -0.02
PNKP-230ENST00000638016 LCN2P80188 198 aa14.94□□□□□ -0.02
PNKP-230ENST00000638016 HOXA4Q00056 320 aaPredicted RBP14.94□□□□□ -0.02
PNKP-230ENST00000638016 SNAI3Q3KNW1 292 aa14.94□□□□□ -0.02
PNKP-230ENST00000638016 TRPM8Q7Z2W7 1104 aa14.94□□□□□ -0.02
PNKP-230ENST00000638016 LINC00471Q8N535 108 aa14.94□□□□□ -0.02
PNKP-230ENST00000638016 ZNF283Q8N7M2 679 aa14.94□□□□□ -0.02
PNKP-230ENST00000638016 OR8G5Q8NG78 346 aa14.94□□□□□ -0.02
PNKP-230ENST00000638016 OR2T4Q8NH00 348 aa14.94□□□□□ -0.02
PNKP-230ENST00000638016 RAB39BQ96DA2 213 aa14.94□□□□□ -0.02
PNKP-230ENST00000638016 COG8Q96MW5 612 aa14.94□□□□□ -0.02
PNKP-230ENST00000638016 C1orf21Q9H246 121 aa14.94□□□□□ -0.02
PNKP-230ENST00000638016 TRAV20A0A0B4J274 112 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 FAM183AA6NL82 134 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 IQCF6A8MYZ5 107 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 F5H5P2 479 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 J3QW42 95 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 CST1P01037 141 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 LCATP04180 440 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 SPARCP09486 303 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 ZNF823P16415 610 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 SPI1P17947 270 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 ADRA2CP18825 462 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 TUBG1P23258 451 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 TNFSF4P23510 183 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 ZFP36P26651 326 aaKnown RBP14.93□□□□□ -0.02
PNKP-230ENST00000638016 MMP16P51512 607 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 GK2Q14410 553 aaPredicted RBP14.93□□□□□ -0.02
PNKP-230ENST00000638016 ZMYND11Q15326 602 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 SPATC1Q76KD6 591 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 DCXRQ7Z4W1 244 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 OR5L1Q8NGL2 311 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 OR2AE1Q8NHA4 323 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 BCAS4Q8TDM0 211 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms