RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 BCAP31P51572 246 aa19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 MRPS34P82930 218 aaKnown RBP19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 SPOCK1Q08629 439 aa19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 RIN1Q13671 783 aa19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 TMEM244Q5VVB8 128 aa19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 MTFR2Q6P444 385 aa19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 COMMD2Q86X83 199 aa19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 FGGYQ96C11 551 aa19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 TMEM38BQ9NVV0 291 aa19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 NUFIP1Q9UHK0 495 aaKnown RBP19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 KCNMB2Q9Y691 235 aa19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 SYT7O43581 403 aa19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 UBE2NLQ5JXB2 153 aa19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 C9orf135Q5VTT2 229 aa19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 GJC3Q8NFK1 279 aa19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 GCDHQ92947 438 aaPredicted RBP19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 ADAT3Q96EY9 351 aaPredicted RBP19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 KCNJ15Q99712 375 aa19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 PRRG4Q9BZD6 226 aa19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 CGGBP1Q9UFW8 167 aaPredicted RBP19.04■□□□□ 0.64
CHRNA7-228ENST00000637519 BOD1L1Q8NFC6 3051 aa19.03■□□□□ 0.64
CHRNA7-228ENST00000637519 TRGV5A0A0B4J1U4 118 aa19.03■□□□□ 0.64
CHRNA7-228ENST00000637519 TMIGD3P0DMS9 266 aaPredicted RBP19.03■□□□□ 0.64
CHRNA7-228ENST00000637519 IGFBP3P17936 291 aaPredicted RBP19.03■□□□□ 0.64
CHRNA7-228ENST00000637519 FAM27BQ5VT28 67 aa19.03■□□□□ 0.64
CHRNA7-228ENST00000637519 ABHD12BQ7Z5M8 362 aaPredicted RBP19.03■□□□□ 0.64
CHRNA7-228ENST00000637519 ZFP3Q96NJ6 502 aa19.03■□□□□ 0.64
CHRNA7-228ENST00000637519 ZDHHC11Q9H8X9 412 aa19.03■□□□□ 0.64
CHRNA7-228ENST00000637519 GPR35Q9HC97 309 aa19.03■□□□□ 0.64
CHRNA7-228ENST00000637519 TBCCD1Q9NVR7 557 aa19.03■□□□□ 0.64
CHRNA7-228ENST00000637519 PLEK2Q9NYT0 353 aa19.03■□□□□ 0.64
CHRNA7-228ENST00000637519 MCTS1Q9ULC4 181 aaKnown RBP19.03■□□□□ 0.64
CHRNA7-228ENST00000637519 IGKV3D-15A0A087WSY6 115 aa19.02■□□□□ 0.64
CHRNA7-228ENST00000637519 A0A1B0GTI1 187 aa19.02■□□□□ 0.64
CHRNA7-228ENST00000637519 KLK10O43240 276 aa19.02■□□□□ 0.64
CHRNA7-228ENST00000637519 MRPL33O75394 65 aaKnown RBP19.02■□□□□ 0.64
CHRNA7-228ENST00000637519 SLC6A9P48067 706 aa19.02■□□□□ 0.64
CHRNA7-228ENST00000637519 RSPO1Q2MKA7 263 aaPredicted RBP19.02■□□□□ 0.64
CHRNA7-228ENST00000637519 PRSS45Q7RTY3 260 aa19.02■□□□□ 0.64
CHRNA7-228ENST00000637519 OR1J2Q8NGS2 313 aa19.02■□□□□ 0.64
CHRNA7-228ENST00000637519 FGFBP3Q8TAT2 258 aa19.02■□□□□ 0.64
CHRNA7-228ENST00000637519 SYNPRQ8TBG9 265 aa19.02■□□□□ 0.64
CHRNA7-228ENST00000637519 SETD6Q8TBK2 473 aa19.02■□□□□ 0.64
CHRNA7-228ENST00000637519 FOXB1Q99853 325 aa19.02■□□□□ 0.64
CHRNA7-228ENST00000637519 SLC7A10Q9NS82 523 aa19.02■□□□□ 0.64
CHRNA7-228ENST00000637519 CKLFQ9UBR5 152 aa19.02■□□□□ 0.64
CHRNA7-228ENST00000637519 TFECO14948 347 aaPredicted RBP19.02■□□□□ 0.63
CHRNA7-228ENST00000637519 EEF1E1O43324 174 aaKnown RBP19.02■□□□□ 0.63
CHRNA7-228ENST00000637519 PTBP1P26599 531 aaKnown RBP eCLIP19.02■□□□□ 0.63
CHRNA7-228ENST00000637519 CARTPTQ16568 116 aa19.02■□□□□ 0.63
CHRNA7-228ENST00000637519 IGFL2Q6UWQ7 119 aa19.02■□□□□ 0.63
CHRNA7-228ENST00000637519 CADM3Q8N126 398 aa19.02■□□□□ 0.63
CHRNA7-228ENST00000637519 OR51D1Q8NGF3 324 aa19.02■□□□□ 0.63
CHRNA7-228ENST00000637519 CPT1CQ8TCG5 803 aa19.02■□□□□ 0.63
CHRNA7-228ENST00000637519 THRSPQ92748 146 aa19.02■□□□□ 0.63
CHRNA7-228ENST00000637519 TMEM45BQ96B21 275 aa19.02■□□□□ 0.63
CHRNA7-228ENST00000637519 FAM71F1Q96KD3 344 aaPredicted RBP19.02■□□□□ 0.63
CHRNA7-228ENST00000637519 HDHD2Q9H0R4 259 aa19.02■□□□□ 0.63
CHRNA7-228ENST00000637519 GPR84Q9NQS5 396 aa19.02■□□□□ 0.63
CHRNA7-228ENST00000637519 ZNF275Q9NSD4 429 aaPredicted RBP19.02■□□□□ 0.63
CHRNA7-228ENST00000637519 CAMK2AQ9UQM7 478 aa19.02■□□□□ 0.63
CHRNA7-228ENST00000637519 KRT33AO76009 404 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 ACTL6AO96019 429 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 FSTP19883 344 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 FOXG1P55316 489 aaPredicted RBP19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 GRB2P62993 217 aaKnown RBP19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 HIST1H3AP68431 136 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 FOXC1Q12948 553 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 ASAH1Q13510 395 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 ELFN2Q5R3F8 820 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 SFRP5Q5T4F7 317 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 HIST2H3PS2Q5TEC6 136 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 HIST2H3AQ71DI3 136 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 RHOUQ7L0Q8 258 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 GLCCI1Q86VQ1 547 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 C19orf18Q8NEA5 215 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 WDYHV1Q96HA8 205 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 NIPAL2Q9H841 368 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 STEAP1Q9UHE8 339 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 TGM6O95932 706 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 HLA-DQB1P01920 261 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 ZNF24P17028 368 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 GNALP38405 381 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 EFNB2P52799 333 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 ZNF774Q6NX45 483 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 TRIM63Q969Q1 353 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 MMP28Q9H239 520 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 SLCO5A1Q9H2Y9 848 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 FOXJ3Q9UPW0 622 aa19.01■□□□□ 0.63
CHRNA7-228ENST00000637519 RTTNQ86VV8 2226 aa19■□□□□ 0.63
CHRNA7-228ENST00000637519 TNRC6AQ8NDV7 1962 aaKnown RBP19■□□□□ 0.63
CHRNA7-228ENST00000637519 A0A1B0GVI7 797 aa19■□□□□ 0.63
CHRNA7-228ENST00000637519 CDK2AP1O14519 115 aa19■□□□□ 0.63
CHRNA7-228ENST00000637519 PTHLHP12272 177 aa19■□□□□ 0.63
CHRNA7-228ENST00000637519 ABOP16442 354 aa19■□□□□ 0.63
CHRNA7-228ENST00000637519 ZNF32P17041 273 aa19■□□□□ 0.63
CHRNA7-228ENST00000637519 DGCR2P98153 550 aa19■□□□□ 0.63
CHRNA7-228ENST00000637519 BCL2A1Q16548 175 aa19■□□□□ 0.63
CHRNA7-228ENST00000637519 AKR7LQ8NHP1 331 aa19■□□□□ 0.63
CHRNA7-228ENST00000637519 MOB1AQ9H8S9 216 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms