RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 TMEM269A0A1B0GVZ9 245 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 SULT2B1O00204 365 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 DLL1O00548 723 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 ABCD4O14678 606 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 MPZL1O95297 269 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 BDKRB2P30411 391 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 CASRP41180 1078 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 DAP3P51398 398 aaKnown RBP12.98□□□□□ -0.33
CLN6-215ENST00000636674 PPIAP62937 165 aaKnown RBP12.98□□□□□ -0.33
CLN6-215ENST00000636674 CXADRP78310 365 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 PPP1R1AQ13522 171 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 FAM74A1Q5RGS3 127 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 C3orf33Q6P1S2 294 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 SLC29A4Q7RTT9 530 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 OR2W3Q7Z3T1 314 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 TRAPPC6BQ86SZ2 158 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 MISPQ8IVT2 679 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 PAQR4Q8N4S7 273 aaPredicted RBP12.98□□□□□ -0.33
CLN6-215ENST00000636674 ACBD4Q8NC06 268 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 OR4S1Q8NGB4 309 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.98□□□□□ -0.33
CLN6-215ENST00000636674 KCNK17Q96T54 332 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 PHB2Q99623 299 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 GAL3ST1Q99999 423 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 B3GNT4Q9C0J1 378 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 ZMAT3Q9HA38 289 aaKnown RBP12.98□□□□□ -0.33
CLN6-215ENST00000636674 COPS7AQ9UBW8 275 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 EXPH5Q8NEV8 1989 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 ATP1B3P54709 279 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 UNC119Q13432 240 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 SNTB1Q13884 538 aaKnown RBP12.98□□□□□ -0.33
CLN6-215ENST00000636674 CDNFQ49AH0 187 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 PRAMEF17Q5VTA0 474 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 ZNF529Q6P280 563 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 CLRN3Q8NCR9 226 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 ZNF248Q8NDW4 579 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 OR5T2Q8NGG2 359 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 STOML3Q8TAV4 291 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 NECAB3Q96P71 396 aaPredicted RBP12.98□□□□□ -0.33
CLN6-215ENST00000636674 OR11A1Q9GZK7 315 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 SLC6A15Q9H2J7 730 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 GAREM1Q9H706 876 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 CNTD2Q9H8S5 307 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 IFT46Q9NQC8 304 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 FAM206AQ9NX38 181 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 TAS2R3Q9NYW6 316 aa12.98□□□□□ -0.33
CLN6-215ENST00000636674 PCDH15Q96QU1 1955 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 RAB19A4D1S5 217 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 DBX1A6NMT0 343 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 MS4A18H0YCH9 400 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 CCSO14618 274 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 STK17BO94768 372 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 HLA-DOBP13765 273 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 GPR85P60893 370 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 ZNF169Q14929 603 aaPredicted RBP12.97□□□□□ -0.33
CLN6-215ENST00000636674 TAF13Q15543 124 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 NKPD1Q17RQ9 610 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 MS4A18Q3C1V0 323 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 SLC22A24Q8N4F4 322 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 MFSD8Q8NHS3 518 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 TMEM234Q8WY98 164 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 ST8SIA1Q92185 356 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 LRRC46Q96FV0 321 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 ZDHHC12Q96GR4 267 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 ZNF75AQ96N20 296 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 ARPC5LQ9BPX5 153 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 ZNF471Q9BX82 626 aaPredicted RBP12.97□□□□□ -0.33
CLN6-215ENST00000636674 FAM117AQ9C073 453 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 ANAPC10Q9UM13 185 aa12.97□□□□□ -0.33
CLN6-215ENST00000636674 TRBV6-7A0A0A0MS04 114 aa12.96□□□□□ -0.33
CLN6-215ENST00000636674 C19orf67A6NJJ6 358 aa12.96□□□□□ -0.33
CLN6-215ENST00000636674 SHISA7A6NL88 538 aa12.96□□□□□ -0.33
CLN6-215ENST00000636674 P2RY10O00398 339 aa12.96□□□□□ -0.33
CLN6-215ENST00000636674 NDUFA2O43678 99 aa12.96□□□□□ -0.33
CLN6-215ENST00000636674 LMX1BO60663 402 aa12.96□□□□□ -0.33
CLN6-215ENST00000636674 DUS4LO95620 317 aaKnown RBP12.96□□□□□ -0.33
CLN6-215ENST00000636674 ICAM2P13598 275 aa12.96□□□□□ -0.33
CLN6-215ENST00000636674 RAB3AP20336 220 aa12.96□□□□□ -0.33
CLN6-215ENST00000636674 PRKXP51817 358 aa12.96□□□□□ -0.33
CLN6-215ENST00000636674 IL13RA1P78552 427 aa12.96□□□□□ -0.33
CLN6-215ENST00000636674 MC2RQ01718 297 aa12.96□□□□□ -0.33
CLN6-215ENST00000636674 INPP5JQ15735 1006 aaPredicted RBP12.96□□□□□ -0.33
CLN6-215ENST00000636674 CARFQ8N187 725 aa12.96□□□□□ -0.33
CLN6-215ENST00000636674 BPIFCQ8NFQ6 507 aa12.96□□□□□ -0.33
CLN6-215ENST00000636674 THAP6Q8TBB0 222 aa12.96□□□□□ -0.33
CLN6-215ENST00000636674 PHF7Q9BWX1 381 aaPredicted RBP12.96□□□□□ -0.33
CLN6-215ENST00000636674 FANCFQ9NPI8 374 aa12.96□□□□□ -0.33
CLN6-215ENST00000636674 NPIPA5E9PKD4 350 aa12.96□□□□□ -0.34
CLN6-215ENST00000636674 F8VVB4 439 aa12.96□□□□□ -0.34
CLN6-215ENST00000636674 F8VWA3 439 aa12.96□□□□□ -0.34
CLN6-215ENST00000636674 TTRP02766 147 aa12.96□□□□□ -0.34
CLN6-215ENST00000636674 DCNP07585 359 aaKnown RBP12.96□□□□□ -0.34
CLN6-215ENST00000636674 H2BFMP0C1H6 154 aa12.96□□□□□ -0.34
CLN6-215ENST00000636674 TAS2R31P59538 309 aa12.96□□□□□ -0.34
CLN6-215ENST00000636674 FMODQ06828 376 aa12.96□□□□□ -0.34
CLN6-215ENST00000636674 CD163Q86VB7 1156 aa12.96□□□□□ -0.34
CLN6-215ENST00000636674 OR1M1Q8NGA1 313 aa12.96□□□□□ -0.34
CLN6-215ENST00000636674 ZNF416Q9BWM5 594 aa12.96□□□□□ -0.34
CLN6-215ENST00000636674 KLHL13Q9P2N7 655 aa12.96□□□□□ -0.34
CLN6-215ENST00000636674 PISDQ9UG56 409 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms