RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 PFN1P07737 140 aaKnown RBP1.32□□□□□ -2.2
SRP54-214ENST00000630962 CT45A6P0DMU7 189 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 CT45A5P0DMU8 189 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 CT45A7P0DMV0 189 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 ATF6P18850 670 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 U2AF2P26368 475 aaKnown RBP eCLIP1.32□□□□□ -2.26e-10■■□□□ 11.8
SRP54-214ENST00000630962 NSG1P42857 185 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 ATP5OP48047 213 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 GBX2P52951 348 aaPredicted RBP1.32□□□□□ -2.2
SRP54-214ENST00000630962 RPL23P62829 140 aaKnown RBP1.32□□□□□ -2.2
SRP54-214ENST00000630962 IL24Q13007 206 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 PPP1R7Q15435 360 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 SSX2Q16385 188 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 CT45A1Q5HYN5 189 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 APOBEC3HQ6NTF7 200 aaKnown RBP1.32□□□□□ -2.2
SRP54-214ENST00000630962 MED27Q6P2C8 311 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 NPSR1Q6W5P4 371 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 TMEM136Q6ZRR5 245 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 CBR4Q8N4T8 237 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 NPWQ8N729 165 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 OR4M1Q8NGD0 313 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 CT45A3Q8NHU0 189 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 LRRC29Q8WV35 223 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 STACQ99469 402 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 ZBTB18Q99592 522 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 TOLLIPQ9H0E2 274 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 TMEM9BQ9NQ34 198 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 HRASLS2Q9NWW9 162 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 PSMC3IPQ9P2W1 217 aaPredicted RBP1.32□□□□□ -2.2
SRP54-214ENST00000630962 CTNNA3Q9UI47 895 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 YARS2Q9Y2Z4 477 aaKnown RBP1.32□□□□□ -2.2
SRP54-214ENST00000630962 STARD10Q9Y365 291 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 ZBED9Q6R2W3 1325 aa1.32□□□□□ -2.2
SRP54-214ENST00000630962 GABRR3A8MPY1 467 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 CEACAM18A8MTB9 384 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 PRAMEF26H0Y7S4 382 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 L7N2F9 121 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 AIM2O14862 343 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 SCO1O75880 301 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 SERPINA5P05154 406 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 CD37P11049 281 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 CD99P14209 185 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 ZNF43P17038 809 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 GGT1P19440 569 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 LOXP28300 417 aaPredicted RBP1.31□□□□□ -2.2
SRP54-214ENST00000630962 PCK1P35558 622 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 TGFBR2P37173 567 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 SYKP43405 635 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 TPMTP51580 245 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 RND2P52198 227 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 TGM3Q08188 693 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 PNOCQ13519 176 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 RCAN2Q14206 197 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 GPR107Q5VW38 600 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 MRPL55Q7Z7F7 128 aaKnown RBP1.31□□□□□ -2.2
SRP54-214ENST00000630962 SGPP2Q8IWX5 399 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 NECAB1Q8N987 351 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 SDR9C7Q8NEX9 313 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 OR1J4Q8NGS1 313 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 TSGA13Q96PP4 275 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 KLF6Q99612 283 aaPredicted RBP1.31□□□□□ -2.2
SRP54-214ENST00000630962 SEC22CQ9BRL7 303 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 FGF20Q9NP95 211 aaPredicted RBP1.31□□□□□ -2.2
SRP54-214ENST00000630962 PARP11Q9NR21 331 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 SLC2A8Q9NY64 477 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 CRCT1Q9UGL9 99 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 HMGXB4Q9UGU5 601 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 ZSWIM8A7E2V4 1837 aa1.31□□□□□ -2.2
SRP54-214ENST00000630962 ARPC4-TTLL3A0A0A6YYG9 625 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 A6NDN8 102 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 C4orf51C9J302 202 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 OR7C2O60412 319 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 EIF4EP06730 217 aaKnown RBP1.3□□□□□ -2.2
SRP54-214ENST00000630962 TROVE2P10155 538 aaKnown RBP eCLIP1.3□□□□□ -2.2
SRP54-214ENST00000630962 SLC2A3P11169 496 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 ZNF24P17028 368 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 NTF3P20783 257 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 HTR1DP28221 377 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 TMED10P49755 219 aaKnown RBP1.3□□□□□ -2.2
SRP54-214ENST00000630962 CCNG1P51959 295 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 RPS23P62266 143 aaKnown RBP1.3□□□□□ -2.2
SRP54-214ENST00000630962 TNFRSF9Q07011 255 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 SIGLEC14Q08ET2 396 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 BTN1A1Q13410 526 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 DEFB134Q4QY38 66 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 TCF24Q7RTU0 167 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 ADM2Q7Z4H4 148 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 MDP1Q86V88 176 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 UBE2J2Q8N2K1 259 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 EIF1ADQ8N9N8 165 aaKnown RBP1.3□□□□□ -2.2
SRP54-214ENST00000630962 SLC26A10Q8NG04 563 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 OR6Q1Q8NGQ2 317 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 TUBGCP3Q96CW5 907 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 FHOD3Q2V2M9 1422 aa1.3□□□□□ -2.2
SRP54-214ENST00000630962 TRIP11Q15643 1979 aa1.29□□□□□ -2.2
SRP54-214ENST00000630962 IGHV1-69DA0A0B4J2H0 117 aa1.29□□□□□ -2.2
SRP54-214ENST00000630962 A0A0J9YXV3 536 aa1.29□□□□□ -2.2
SRP54-214ENST00000630962 CENPBD1B2RD01 187 aa1.29□□□□□ -2.2
SRP54-214ENST00000630962 SMKR1H3BMG3 65 aa1.29□□□□□ -2.2
SRP54-214ENST00000630962 FOXE1O00358 373 aaPredicted RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms