RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 POU6F2P78424 691 aaPredicted RBP4.24□□□□□ -1.73
LINC00550-201ENST00000629293 BDH1Q02338 343 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 RUNX1T1Q06455 604 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 CT45A2Q5DJT8 189 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 CLEC12AQ5QGZ9 265 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 NPSR1Q6W5P4 371 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 H1FNTQ75WM6 255 aaPredicted RBP4.24□□□□□ -1.73
LINC00550-201ENST00000629293 SHFQ7M4L6 423 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 NRARPQ7Z6K4 114 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 LRRC75A-AS1Q8N1F1 130 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 OR2T33Q8NG76 320 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 OR4F15Q8NGB8 312 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 CTHRC1Q96CG8 243 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 DNAJA3Q96EY1 480 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 FN3KQ9H479 309 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 ABCB9Q9NP78 766 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 ASB6Q9NWX5 421 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 SLC7A7Q9UM01 511 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 TRAPPC13A5PLN9 417 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 CDHR4A6H8M9 788 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 FRG2CA6NGY1 282 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 OR6C70A6NIJ9 312 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 B4DXG7 233 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 IFNA2P01563 188 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 HMGN1P05114 100 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 DBIP07108 87 aaKnown RBP4.24□□□□□ -1.73
LINC00550-201ENST00000629293 GUSBP08236 651 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 CSF3P09919 207 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 PRG2P13727 222 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 HPGDP15428 266 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 IL32P24001 234 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 SLC6A8P48029 635 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 DSCR4P56555 118 aaPredicted RBP4.24□□□□□ -1.73
LINC00550-201ENST00000629293 SNTA1Q13424 505 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 RIN1Q13671 783 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 DCST2Q5T1A1 773 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 NIPAL3Q6P499 406 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 ZCCHC12Q6PEW1 402 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 STAC2Q6ZMT1 411 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 RNF113BQ8IZP6 322 aaKnown RBP4.24□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF614Q8N883 585 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 GDPD1Q8N9F7 314 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 SCAIQ8N9R8 606 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 OR6F1Q8NGZ6 308 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 DNAJA4Q8WW22 397 aaPredicted RBP4.24□□□□□ -1.73
LINC00550-201ENST00000629293 ROBO4Q8WZ75 1007 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 TMEM203Q969S6 136 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 NEDD4LQ96PU5 975 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 REG4Q9BYZ8 158 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 RTN4RQ9BZR6 473 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 CHODLQ9H9P2 273 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 POU2F3Q9UKI9 436 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 TGP01266 2768 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 A0A1W2PQL4 384 aaPredicted RBP4.24□□□□□ -1.73
LINC00550-201ENST00000629293 CCDC182A6NF36 153 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 UNC119BA6NIH7 251 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 RGS5O15539 181 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 AKAP8O43823 692 aaKnown RBP4.24□□□□□ -1.73
LINC00550-201ENST00000629293 GPRIN2O60269 458 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 SYNGR4O95473 234 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 SLC2A10O95528 541 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 CH25HO95992 272 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 AK1P00568 194 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 SOD3P08294 240 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 TRAPPC2P0DI81 140 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 TRAPPC2BP0DI82 140 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 MAKP20794 623 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 DRD5P21918 477 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 RPS5P46782 204 aaKnown RBP4.24□□□□□ -1.73
LINC00550-201ENST00000629293 MXD1Q05195 221 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 CARTPTQ16568 116 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 CHRFAM7AQ494W8 412 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 ARMC4Q5T2S8 1044 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 CCNJQ5T5M9 372 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 MRPL2Q5T653 305 aaKnown RBP4.24□□□□□ -1.73
LINC00550-201ENST00000629293 DDI2Q5TDH0 399 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF322Q6U7Q0 402 aaPredicted RBP4.24□□□□□ -1.73
LINC00550-201ENST00000629293 PRSS57Q6UWY2 283 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 TMPRSS11FQ6ZWK6 438 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 RANBP3LQ86VV4 465 aaPredicted RBP4.24□□□□□ -1.73
LINC00550-201ENST00000629293 GID4Q8IVV7 300 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 LNX2Q8N448 690 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 KLHL36Q8N4N3 616 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 CDRT4Q8N9R6 151 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 FANK1Q8TC84 345 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 AP3S1Q92572 193 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 SLC35B4Q969S0 331 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 C3orf49Q96BT1 292 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 SAMD8Q96LT4 415 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 OR52D1Q9H346 318 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 PPP1R3EQ9H7J1 279 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 EVA1AQ9H8M9 152 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 KRCC1Q9NPI7 259 aaPredicted RBP4.24□□□□□ -1.73
LINC00550-201ENST00000629293 HEYLQ9NQ87 328 aaPredicted RBP4.24□□□□□ -1.73
LINC00550-201ENST00000629293 POLE3Q9NRF9 147 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 NKIRAS2Q9NYR9 191 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 MCTS1Q9ULC4 181 aaKnown RBP4.24□□□□□ -1.73
LINC00550-201ENST00000629293 HTR3EA5X5Y0 456 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 HMX3A6NHT5 357 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 GABRPO00591 440 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms