RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 POFUT1Q9H488 388 aa11.93□□□□□ -0.5
PCDHGC3-208ENST00000622836 SAC3D1A6NKF1 404 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 VWC2LB2RUY7 222 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 M0R135 149 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 CDC14BO60729 498 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 NCR1O76036 304 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 ACSM4P0C7M7 580 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 IGFBP5P24593 272 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 MMP15P51511 669 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 PPP2R2BQ00005 443 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 LOXL1Q08397 574 aaPredicted RBP11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 MALLQ13021 153 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 EIF2B1Q14232 305 aaKnown RBP11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 HLXQ14774 488 aaPredicted RBP11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 PTGES3Q15185 160 aaKnown RBP11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 LINC01590Q5TEZ4 76 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 ZFP1Q6P2D0 407 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 SPATC1Q76KD6 591 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 CXXC5Q7LFL8 322 aaKnown RBP11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 SLAMF6Q96DU3 332 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 ZNF799Q96GE5 643 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 GABARAPL1Q9H0R8 117 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 CHODLQ9H9P2 273 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 SAP30LQ9HAJ7 183 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 MSL2Q9HCI7 577 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 PNRC2Q9NPJ4 139 aaKnown RBP11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 PURGQ9UJV8 347 aaKnown RBP11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 ZDHHC8Q9ULC8 765 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 OAZ3Q9UMX2 235 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 C2CD3Q4AC94 2353 aa11.92□□□□□ -0.5
PCDHGC3-208ENST00000622836 HIVEP2P31629 2446 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 CR1P17927 2039 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 ZSCAN5BA6NJL1 495 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 ZNF878C9JN71 531 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 PRODHO43272 600 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 IGHV1-46P01743 117 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 RAC2P15153 192 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 ACHEP22303 614 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 TNFSF4P23510 183 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 COL8A2P25067 703 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 HSD11B1P28845 292 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 SLC15A1P46059 708 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 GPR6P46095 362 aaPredicted RBP11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 RIPPLY3P57055 190 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 TMEM249Q2WGJ8 235 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 TMEM255AQ5JRV8 349 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 TEX30Q5JUR7 227 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 KDM4DQ6B0I6 523 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 USP51Q70EK9 711 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 SHFQ7M4L6 423 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 DPY19L4Q7Z388 723 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 OR5AS1Q8N127 324 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 OR10S1Q8NGN2 331 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 HAVCR1Q96D42 359 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 DIRC2Q96SL1 478 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 CIB1Q99828 191 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 PKP2Q99959 881 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 C1QTNF5Q9BXJ0 243 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 EGLN1Q9GZT9 426 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 DDX28Q9NUL7 540 aaKnown RBP11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 NKIRAS2Q9NYR9 191 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 N6AMT1Q9Y5N5 214 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 ABCA1O95477 2261 aa11.91□□□□□ -0.5
PCDHGC3-208ENST00000622836 IGHV4-61A0A0C4DH41 118 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 IGHV1-69-2A0A0G2JMI3 117 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 PPIHO43447 177 aaKnown RBP11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 SELENOFO60613 162 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 PSKH1P11801 424 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 KITLGP21583 273 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 GIFP27352 417 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 NAA10P41227 235 aaPredicted RBP11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 PRKXP51817 358 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 GRB2P62993 217 aaKnown RBP11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 MRPS11P82912 194 aaKnown RBP11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 CHD3Q12873 2000 aaKnown RBP11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 APOFQ13790 326 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 PCK2Q16822 640 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 RSPO1Q2MKA7 263 aaPredicted RBP11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 HFEQ30201 348 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 FAM209AQ5JX71 171 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 SLC35D3Q5M8T2 416 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 OR2T2Q6IF00 324 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 FBXW12Q6X9E4 464 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 MRPL21Q7Z2W9 205 aaKnown RBP11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 NAA40Q86UY6 237 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 ZNF283Q8N7M2 679 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 BBS1Q8NFJ9 593 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 OR2Z1Q8NG97 314 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 THEM6Q8WUY1 208 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 ELMOD3Q96FG2 381 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 ZNF582Q96NG8 517 aaPredicted RBP11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 RBM4BQ9BQ04 359 aaKnown RBP11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 RIBC2Q9H4K1 309 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 YAE1D1Q9NRH1 226 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 ZNF275Q9NSD4 429 aaPredicted RBP11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 H2AFY2Q9P0M6 372 aaPredicted RBP11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 ORC6Q9Y5N6 252 aa11.9□□□□□ -0.5
PCDHGC3-208ENST00000622836 A0A096LNT2 108 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 H3BNX3 289 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms